Gene XfasM23_0571 details

Gene Information

• Locus tag: XfasM23_0571
• Symbol: ispF
• ID: 6202113
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 680111
• End bp: 680614
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641702108
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001829289
• Protein GI: 182681129
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGGTT TGAATGTTCG CATCGGTCAG GGGTATGACG TGCATGCGTT TGGACCCAGT 
GATCATGTGA TGTTGGGTGG GGTGCGAGTG CCGCATCGTT GCGGTGTGTT GGCACACAGT 
GATGGTGATG TGATCTTGCA TGCGTTGTGT GATGCCATGC TTGGTGCGTT GGGGTTGGGT 
GACATTGGTC AGCACTTTCC ACCTTCCGAT GTACGTTGGA AGGGAGCAGA CAGTGGTGTC 
TTTGTGCGTC ACTGCAACCT GTTGCTGCGC GAACGTGATT GGTGTGTCGG TAATGTTGAT 
GCAACTGCAA TCTGCGAATC GCCGAAGATT GCTCCGTATG TCAATGCGAT GCGTGAGGGG 
ATTGCGCGCT TGCTTGAAGT GCAGCCGGAG TGTGTCAGTG TAAAGGCTAC GACGAGCGAG 
GGACTTGGTT TTATTGGTCG CGGTGAGGGC CTTGCTGCTC AGGTCGTGGT ATTGCTGTAT 
CGCCTTAACG GTGTCGTGGT GTAG 

 

Protein sequence

MTGLNVRIGQ GYDVHAFGPS DHVMLGGVRV PHRCGVLAHS DGDVILHALC DAMLGALGLG 
DIGQHFPPSD VRWKGADSGV FVRHCNLLLR ERDWCVGNVD ATAICESPKI APYVNAMREG 
IARLLEVQPE CVSVKATTSE GLGFIGRGEG LAAQVVVLLY RLNGVVV