Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0567 |
Symbol | |
ID | 6202903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 676462 |
End bp | 677292 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641702104 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_001829285 |
Protein GI | 182681125 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTT GTGGTTTTGA AGTCGGTCTT AACCAGCCAC TTTTCCTGAT TGCCGGTCCT TGTGTGATTG AGTCGCTACA GTTGCAGTTG GATACTGCCG GTGTACTGAA GGAGATCACT TCTAAGCTTG GTTTGAACTT TATCTTTAAG TCCAGTTTTG ATAAGGCGAA CCGAACTTCA GGGAGTAGTT TTCGTGGCCC TGGCTTGGAA GAGGGGTTGA AGGTACTGGA GGCGGTGAAG ACGCAGATTG GGGTGCCAGT ACTGACGGAT GTGCACGAGT ACACGCCAAT AGACGAGGTA GCCACTGTTG TTGATGTGCT GCAAACGCCA GCGTTTTTGG TACGTCAGAC TGATTTCATA CGGAATGTCT GTGCGGTCGG TAAACCGGTC AACATCAAGA AGGGACAGTT TTTGTCGCCA TGGGATATGA AACCTGTGGT TGAGAAAGCA AAGTCGACGG GTAATTCGCA GATTCTTGTA TGTGAACGCG GCGCTTCGTT CGGTTACAAC AACTTGGTTA GCGATATGCG TTCACTGGCG GTGATGCGCG AGACCGGCTG TCCGGTGGTA TTCGACGCGA CTCATTCTGT GCAACTTCCG GGTGCTCAGG GTGGTCGTTC CGGTGGGCAA CGCGAGTTCG TACCGGTGTT GGCGAGGGCA GCTGTGGCGG TGGGTATTTC CGGATTGTTC GCTGAGACTC ACCCAGACCC ACCCAATGCA TTGTCTGATG GCCCCAATGC TTGGCCGTTG CGCACAATGG CGATGTTGTT GGAAACCTTG GTGGAGTTGG ATGCGGTCAC CAAAAAACGA GGTTTCCTCG AGCAGGATTG A
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Protein sequence | MKLCGFEVGL NQPLFLIAGP CVIESLQLQL DTAGVLKEIT SKLGLNFIFK SSFDKANRTS GSSFRGPGLE EGLKVLEAVK TQIGVPVLTD VHEYTPIDEV ATVVDVLQTP AFLVRQTDFI RNVCAVGKPV NIKKGQFLSP WDMKPVVEKA KSTGNSQILV CERGASFGYN NLVSDMRSLA VMRETGCPVV FDATHSVQLP GAQGGRSGGQ REFVPVLARA AVAVGISGLF AETHPDPPNA LSDGPNAWPL RTMAMLLETL VELDAVTKKR GFLEQD
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