Gene XfasM23_0504 details

Gene Information

• Locus tag: XfasM23_0504
• ID: 6203458
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 610019
• End bp: 611908
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641702042
• Product: surface antigen (D15)
• Protein accession: YP_001829225
• Protein GI: 182681065
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0729] Outer membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.89986
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCGAA CGGCATGGAT GCTTCACCTG CAGGATTTGG AAGTCCTTAG ATGCTTCTGG 
AATGTGAGAT TTATCACTCT ATCCATACTG CCTCGGTATA CTGCGCAAAT GCTAAGACGC 
TTTATCCCGC CAATGTTGAG CTTATGGTTG CTCTTCGCTT CTTTGGCTCA GGCGAACGCA 
ACCGTAGACA AAATCCAGAT CAAAGGTTTG GATAAAGGTG ATGACGTTGA GATGATGAAA 
AACATCACTG TCTCGTTATC GTTGTATAGC GTGGTTGGTA AGGAGCAGGG CGAATCCCGG 
CTGGAATACC TGCTCAGCCA AGCCGAGTTC CAGACCCGCC AAGCCTTGGA GCCCTTTGGC 
TATTATGCTC CCGCCATTCG CATTGATGCC CCGCGCCAGA ATGATCACAT CACCGTGGTT 
ATTTACGTGG ACAAAGGAGA GCCGGTCCGG ATACGTCAGG CGCACGTTGC GATGACAGGA 
GCCGCCGCGC AGGACCATTA TCTTCAGCGT GACCTGGAAG ATTTCAAGCC TAAGCTTGGC 
GAAATATTCA ACCATCCCAC GTATGAAGCC AGCAAGGTTC GCATCACCCG GCGCTTGGCT 
GAGCGAGGCT ATTTCGATGC CGATTTCACC CGCCGTCAGG TCGAAGTGAC CCGTGCCACG 
TATGCAGCAG ACATTGATTT GATCTGGGAA AGCGGGCGCC GCTATGACAT GGGGCCCGTT 
CGCTTCCATT ACGACTATTT CCACGAAGGG CTATTTAATC CACTGGTGTA CTGGGAGGAA 
GGTAGCTATT TCCACGAAGG CAAGCTTGAT CGCCTGCGTG AGTCACTGAC CAAATTGGAC 
TATTTCAGCA GCATTGATAT CCAACCAAAG CCCGAGGAAG CGGACTCTGA AGGCAATGTT 
CCCGTTGATG TCAAGCTGGA ACGCGCCAAA AGCAAAATCT ACACGGCGGG CATCAGCTAT 
GGCAGCGAAA GTGGTGCCGG TCTGCGTGCT GGTGTTGAGC GACGTTACAT GAATGCGCGT 
GGACACAAAA TGAATGCACG ATTGGACTAT GCCCAGAATC GCAAAAGCCT CACCACGGCC 
TATCAAATCC CCGCGTTCAA ATGGCTGGAT GGTTGGTACA TATTCTCCGC ACGTGCCTAT 
GATGAGCAGA CCCAGTACAT CGACTTGCGT AACGTGAAGC TATCGGCGGC ACGTAGCGGT 
CAGATCAACC GACATTTGAC CGCAACCGCC TCACTGAACG CGCTACGGGA GCGTTGGCGT 
TATGCGGCCG ATGACGGCAC CAATACAGTG GCTTACCAGC ATTCCACGCT GGTCTACCCA 
CAATTGGAAG CCAGTTATGT TGATGTTGAC GATGCCACCT TCCCCCGCAA TGGGAGCGCC 
GCCACAGTGC TCCTGCGTGG TGGTGCCAGT GCATTTGGTT CCAAAAGTAA CTTTACCCAG 
CTTCATGGCC AACTGCGTTG GTTTCATGGA TTGGGGTCCA GCAGCCGCCT CATCTTACGT 
GGAGAGGTCG GTACCACCTG GGCCAGCGAT TTGGTCGCAA TGCCGCCAAG CTTGCGTTTC 
TTTGCTGGAG GCGTTAACAG CATTCGTGGT TACGCTTTCC GCGAGGTTGG TCCACGTACT 
GCCAAACCGG ATGCCTTCGC ACTCGGTGCC AAACATGTTT TCAGTGCTGG CGCTGAATAT 
GAGTACTACT ACAAAGGAGG ACCCTTTGGT GGCGCCGTGT TCGTGGATAG CGGCAGTGCG 
TTCAATCGCT ATCCGGATTG GCATACCGGC ATTGGTATTG GCTTGCGTTA CCGCTCCCCG 
GTAGGTCCAG TACGTGTGGA TATTGCGCGT GGCTTGAACA AACCCGATTC CAAGATTCAA 
CTGTATATCG ACATTGGGGC CAATCTGTGA 

 

Protein sequence

MMRTAWMLHL QDLEVLRCFW NVRFITLSIL PRYTAQMLRR FIPPMLSLWL LFASLAQANA 
TVDKIQIKGL DKGDDVEMMK NITVSLSLYS VVGKEQGESR LEYLLSQAEF QTRQALEPFG 
YYAPAIRIDA PRQNDHITVV IYVDKGEPVR IRQAHVAMTG AAAQDHYLQR DLEDFKPKLG 
EIFNHPTYEA SKVRITRRLA ERGYFDADFT RRQVEVTRAT YAADIDLIWE SGRRYDMGPV 
RFHYDYFHEG LFNPLVYWEE GSYFHEGKLD RLRESLTKLD YFSSIDIQPK PEEADSEGNV 
PVDVKLERAK SKIYTAGISY GSESGAGLRA GVERRYMNAR GHKMNARLDY AQNRKSLTTA 
YQIPAFKWLD GWYIFSARAY DEQTQYIDLR NVKLSAARSG QINRHLTATA SLNALRERWR 
YAADDGTNTV AYQHSTLVYP QLEASYVDVD DATFPRNGSA ATVLLRGGAS AFGSKSNFTQ 
LHGQLRWFHG LGSSSRLILR GEVGTTWASD LVAMPPSLRF FAGGVNSIRG YAFREVGPRT 
AKPDAFALGA KHVFSAGAEY EYYYKGGPFG GAVFVDSGSA FNRYPDWHTG IGIGLRYRSP 
VGPVRVDIAR GLNKPDSKIQ LYIDIGANL