| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0497 |
|---|
| Symbol | |
|---|
| ID | 6201984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 600114 |
|---|
| End bp | 603791 |
|---|
| Gene Length | 3678 bp |
|---|
| Protein Length | 1225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641702035 |
|---|
| Product | pilus tip-associated protein |
|---|
| Protein accession | YP_001829218 |
|---|
| Protein GI | 182681058 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAC AAGATTTGAT GGTAGGTATG AGCAGGATTA TTCTCAATAA CCTCTTCTTT
TTTAGATGTG TGGTTGCGGT GTTCTCGGCA CACTCATTGG TCATCAGTGG TGCTGTACAT
GCGGGGGTGC AGATCTCCCA GTCCCCATTA CATGGTGGCG GCGACGTGCC AGGCAACCTG
GCTATTGTTG CGTCTATCGA GTTTCCCACG GTGATTAGCG TGGCTAATCT GGCCGACACC
TACACCCCAG GGGTGAGGTA TGTCGGCTAC TTCGATTCCA ACAAGTGCTA CAAATACCAC
TACAGCTCTC GGGAGCTGGA TCGTTACTTC TATCCCGTTG CTTCTCCAAG GCCTCAAGCC
AATTACGGTT GCAATACTAC AGGCGGGGTG TGGGCTGGGA ATTTTCTGAA TTGGGCCGCC
ACCCAGACGA TTGATCCATT TCGCTCCGCA TTGACCGGTG GCTATCGGGT GCGTGACACC
GCCAACGAAA CCATTCTAGA AAAAGCAGTG ATGGATCGTG CTTATCCTGG AAATTTCCCG
CGTCGCACCA TCGAAGGCTT GGCTCTTACC ACTTCAGTGC CGGCGCAGTG GCTCCGTTTC
CGTATGCGCA TTGACGGTCT CGGCAACAGA ATGCGGTTTA CTCAGTTTCC CGGTTTATCG
ACAGATCCTT TAAATACGGA GGGTCAACCT TACGATCCTT CCAGGCATCC ATTAAACAGC
AATGATAGAG GCGTTTACGA AGTGAGCGTC AGAGTCAAAG TGTGCGATGC CTCGGTCGGC
TTGGAGTCCA ACTGTGTGGC CTATCCCAGT GGTTTCTACA AGCCCGAGGG GCTGGTCCAG
GAATATTCCA AGCGTGTCCG CTATAGCGTT TTTAGTTACA AAAATGACGA CTATTACTTG
GACGATGGCG GTGTTCTGCG TGCCCGCCAG AAGTTTGTTG GGCCTAAAAC CTACTATCCG
GAGCAAGGCG AAAAAACCAA CCCCCATGCC GAATGGCATC CTCGAACTGG CGTCCTCTAT
GACAATCCCA ATCCTGAGGA TGCTAAGGCG ACTACTCATC GGGTGGGTCG TACTATCGGC
AATTCCGGGG TGATTAACTA TTTGAATAAG TTCTCTCAGA TGGAGACCGG TAAGAACACG
AAGGGGTTCG ATCCTGTCAG TGAGCTTTAC TACACGGCAT ACCGTTATTT TAAACGCCTG
GGCAATGTCC CGGAATATTC GGTATTGACG GGTTCTGTGA ATGAAAAGTA CCAGCAGGCC
GATGCGTTTC CGGTGATTAC CGATTGGGAT GACCCGATTC GTTATGCCTG CCAGAGCAAT
GTTGTTCTGG GAATCGGCGA TACCCACACC AATTTCGATA AGAATCTACC TGGGAATACC
AACACAACCG GAGAGCCTGT CAAACCCCAA GCGGTCAGAA ATGACAGAAG CATTGACGTG
GTCAAGCGCA TGGCGCAGAT CTTCCAGATG GAAGGCATGA GACAGCAGGA TGCCATGACC
TCGGCTTTGG CACCTTCATT CAACTTTCTA GTGCCTGGCG CCGGAAACAA CTCAGCCTAC
ATTGCCGCTC TGGCCTACGA TGCCCATACC AAGGACATGC GTCCTGATCT TGAAGGGGAT
CAGCTGCTCA CAACACATTG GGTGGATGTG GTGGAGGGGG GGGATTACAA AATTCCAATA
TCAACCAACC AATACTGGTT GGCCGCGAAA TATGGCGGAT TTCAAGTGCC TGCTGGTTAC
GATCCGGATA AGACAGTTAA CCCCCTGTCT GAGGCGACTT GGTGGACCAA CGGCGAGTAC
GTCAATGGTG ATACTAAGGC CAAGCGGGCG GACAATTTCT ACATTGCCGC CGACGCGGAA
AAGATGGTAG CCAGCCTCAA GCATGCTTTC TCGCGCATCG TTGCCGAGAT CAAGGGGGCA
GGGACGGGGC TGTCTAGCAA CAGCGCTAGA CTTGAAACTG GTGCGGTTAC CTACCAGGCA
CAATTTTTCA GTGGCACCTG GCGTGGTGAT CTGATCGCCT ATCACGTAGA TAAAGTGACC
GGCGCGCTCA CCCCATTTTG GAACGCCAAC TTCCCGGCAT GGGAACAGCG TGTTATCAAG
TTTGCCAATG CCACCACACT GCAAGACTTC ACCAAAAAGA ATCTAGGCCA AACCGCGCTG
GCATCGGCGA GTGCGCAGCA GATTAATTAC CTGCGTGGTG ATCGCAGCCA GGAAGGCAAT
GTGCCCGGCA AACTCCGCAT CCGCAGCGGC ATCATGGGAG ATATTGTCAA CTCCCAACCG
CTCTATGTTG GTGCCCCCAA TGGACGGCTG TACACAACTG CGAACTTCAC TGGGGCCAGC
GCCTATGCCG CGTTCGCCGC CCAGCAGGCC AACCGGGTGC CGGTGGTTTA CGTGGGTGCC
AATGACGGCA TGTTGCATGC CTTTGATGCC AATACCGGTA AAGAAATATT TGCATTTGTG
CCTCGTGCGG CCATGCCCAA ATTGCTGGAG TACACCGATC AGAACTACGG ACACCAGTAC
TACGTGGATG GTGAACTGAC CGCCGCTGAT ATTTACGATA CCAAGTTGGG GTGGCGTTCG
GTGCTGGTGG GGACGTTGGG TCGAGGCGGC AAAGGTCTGT TTGCCTTGGA TGTGACCGAC
CCTTCCAATA TTCGTTTGCT GTGGGACAAA ACGTCCGCGG ATATTGGCGG CTTGGGGAAT
ACCTTGAGCA AACCGATGAT TGCGCAGACC TCCGATGGCA CCTGGTCGGT ATTGCTTGGC
AATGGTCCCA ACAGCACTGC GGATAACGCG CAACTGATCG TGATGAATCT GTTGACCGGT
CATGCAGCCC AAGTGCCCGT TAGCAAGACC TCAAACAATG GACTGTCTGG TGTATTTCCC
TGGTCCAGCC AGAGCAACGG CATTACGGAT CGCGTGTATG CCGGGGACCT GCTGGGCACG
TTGTGGCGCT TTACTTTTAG CGATAACGCT TGGAAGGTGG CCCCGCTGTT CACTGCCACG
TATCAAGGGA AGGCGCAGCC GATCAGCGCA ACTCCGCTGG GGGCCATTGA GCGCTCCACG
GGGCGGATGT GGATTTTCTT TGGGACAGGG CGTGCGTTGT CTTCGCATGA TATGGATAAC
AAGGAGGTAC AGAGCTGGTA TGGCCTGATT GACCAGGGAA CGACGATTCC TGGGCGTACT
AGGCTGAGCC AGGTACAGAT TGTTGATGAG GGTGTAGTTA ATGGGTATGC CGTGCGTACG
GTTTCTGATC CTAAGAATAT AGGTACTGAT GGCTGGTATA TGGATCTGAT TTCGCCGAAA
TCCGGTAAGC AGGGAGAACG GATGATTGTG TCCAACATGT TCCGTGGAGC GGCGTTGATC
GGGACCACTC GTATTCCGGA TAACAGCGAC ATTTGCAAGC TCAGCGGCAG TGGGTTTGTC
ATGGCGATCA ACCCATTCAC TGGTGGCCGG TTGGGTCAAT GGTTTTTTGA TCTCAACACT
GGTGGTGGCA GTGGTGGTGC GTTGAATGGT AATCCAGTGT CTGGTGTGGG TGTGAGCAGT
GCGCCGAATA GCCCGGTATT TACCGGCAAT ATCATGCAAA TAGGAGCGGA TGACGGTACG
GTTACGTCGT TGAAGACGCC CTCCAGCGGA GGCCTCAATA TAAACCGTGT GTCATGGCGT
GAAATCTTGA GGCCGTAA
|
|---|
| Protein sequence | MKEQDLMVGM SRIILNNLFF FRCVVAVFSA HSLVISGAVH AGVQISQSPL HGGGDVPGNL
AIVASIEFPT VISVANLADT YTPGVRYVGY FDSNKCYKYH YSSRELDRYF YPVASPRPQA
NYGCNTTGGV WAGNFLNWAA TQTIDPFRSA LTGGYRVRDT ANETILEKAV MDRAYPGNFP
RRTIEGLALT TSVPAQWLRF RMRIDGLGNR MRFTQFPGLS TDPLNTEGQP YDPSRHPLNS
NDRGVYEVSV RVKVCDASVG LESNCVAYPS GFYKPEGLVQ EYSKRVRYSV FSYKNDDYYL
DDGGVLRARQ KFVGPKTYYP EQGEKTNPHA EWHPRTGVLY DNPNPEDAKA TTHRVGRTIG
NSGVINYLNK FSQMETGKNT KGFDPVSELY YTAYRYFKRL GNVPEYSVLT GSVNEKYQQA
DAFPVITDWD DPIRYACQSN VVLGIGDTHT NFDKNLPGNT NTTGEPVKPQ AVRNDRSIDV
VKRMAQIFQM EGMRQQDAMT SALAPSFNFL VPGAGNNSAY IAALAYDAHT KDMRPDLEGD
QLLTTHWVDV VEGGDYKIPI STNQYWLAAK YGGFQVPAGY DPDKTVNPLS EATWWTNGEY
VNGDTKAKRA DNFYIAADAE KMVASLKHAF SRIVAEIKGA GTGLSSNSAR LETGAVTYQA
QFFSGTWRGD LIAYHVDKVT GALTPFWNAN FPAWEQRVIK FANATTLQDF TKKNLGQTAL
ASASAQQINY LRGDRSQEGN VPGKLRIRSG IMGDIVNSQP LYVGAPNGRL YTTANFTGAS
AYAAFAAQQA NRVPVVYVGA NDGMLHAFDA NTGKEIFAFV PRAAMPKLLE YTDQNYGHQY
YVDGELTAAD IYDTKLGWRS VLVGTLGRGG KGLFALDVTD PSNIRLLWDK TSADIGGLGN
TLSKPMIAQT SDGTWSVLLG NGPNSTADNA QLIVMNLLTG HAAQVPVSKT SNNGLSGVFP
WSSQSNGITD RVYAGDLLGT LWRFTFSDNA WKVAPLFTAT YQGKAQPISA TPLGAIERST
GRMWIFFGTG RALSSHDMDN KEVQSWYGLI DQGTTIPGRT RLSQVQIVDE GVVNGYAVRT
VSDPKNIGTD GWYMDLISPK SGKQGERMIV SNMFRGAALI GTTRIPDNSD ICKLSGSGFV
MAINPFTGGR LGQWFFDLNT GGGSGGALNG NPVSGVGVSS APNSPVFTGN IMQIGADDGT
VTSLKTPSSG GLNINRVSWR EILRP
|
|---|
| |