| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0486 |
|---|
| Symbol | |
|---|
| ID | 6202647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 588182 |
|---|
| End bp | 588676 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641702024 |
|---|
| Product | peptidylprolyl isomerase |
|---|
| Protein accession | YP_001829207 |
|---|
| Protein GI | 182681047 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTCA TTGCTCATTT AGACACTGTC CGAGGGCCGA TCAAAATCAA TCTATTCGCT
GACAAAACCC CATTAACCGT CGCTAATTTC GTTAATTTGG CCAAGCGCGG CTTCTACGAC
GGTTTAAACT TCCATCGTGT GATCGCCAAT TTCATGATTC AGGGCGGCTG CCCCGAAGGT
TCCGGCCACG GTGGTCCAGG CTACCACTTT GAAGATGAAA CCAATAATGG CATGTGCCAC
GAACGCGGCT CACTGTCGAT GGCCAATGCA GGCCCTAATA CGAATGGCAG CCAGTTTTTC
ATCACTCATG TAGCGACGCC ATGGCTAGAT GGCAAACACA CGGTATTTGG GAAAGTACTT
GATGGCCAGG ATGTGGTGGA TGCAATCGCC CAAGGCGACA TCATCAACAA AATCACAATT
GAAGGCGATA CTGATGGCGT ACTAGCCCTT AAAACTGATC GCATCATCGA ATGGAATTCG
ATCCTTGCCA CCTAA
|
|---|
| Protein sequence | MHLIAHLDTV RGPIKINLFA DKTPLTVANF VNLAKRGFYD GLNFHRVIAN FMIQGGCPEG
SGHGGPGYHF EDETNNGMCH ERGSLSMANA GPNTNGSQFF ITHVATPWLD GKHTVFGKVL
DGQDVVDAIA QGDIINKITI EGDTDGVLAL KTDRIIEWNS ILAT
|
|---|
| |