| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0456 |
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| Symbol | rpsD |
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| ID | 6203282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 548278 |
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| End bp | 548904 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641701990 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001829177 |
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| Protein GI | 182681017 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.189833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT ATATCGGCCC TAGTTGTAAG CTTGCGCGCC GCGAAGGCGC CGACTTATCC
TTAAAGAGTC CATCTCGTGC TTTAGATTCT AAGTGTAAAT TGGAACAGAG GCCTGGTCAG
CACGGTGCTG TACGAAAGTC TAAATTGTCT GATTACGCTT CTCAATTGCG CGAAAAACAA
AAAGTTAAGC GTATTTATGG TGTTTTGGAG CGTCAGTTCC GTAATTATTA TAAAAATGCT
TCTACTAAAA AAGGTAACAC TGGGGAGAAT TTGCTTCAGT TGTTGGAAAC TCGTTTGGAT
AATGTTATTT ACCGCATGGG TTTTGCTGTT ACACGTCCTG CTGCTCGTCA GTTGGTCTCT
CACCGTAGTG TGTTGGTCAA TGGGAAGATG GTAAATTTGC CTTCGTATCA TGTTAAGCCT
GGTGATGTGG TTGCTCTCTC TCAGAGAGCG CAAAAGTATT TGTGTGTTCA AGAGTCGTTG
ACTATAAAAG ATCAGCATGG TTCCGCTTTT TCCTGGATTG AGGTTGATTC TGAGAAGTTC
AGTGGTGTCT TTAAGGCTCT TCCGGATCGT GCTGACTTAC CTTCGGATAT CAATGAAGCT
TTGATTGTAG AGTTGTATTC AAAATAA
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| Protein sequence | MARYIGPSCK LARREGADLS LKSPSRALDS KCKLEQRPGQ HGAVRKSKLS DYASQLREKQ
KVKRIYGVLE RQFRNYYKNA STKKGNTGEN LLQLLETRLD NVIYRMGFAV TRPAARQLVS
HRSVLVNGKM VNLPSYHVKP GDVVALSQRA QKYLCVQESL TIKDQHGSAF SWIEVDSEKF
SGVFKALPDR ADLPSDINEA LIVELYSK
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