| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0453 |
|---|
| Symbol | secY |
|---|
| ID | 6203267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 545985 |
|---|
| End bp | 547358 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641701987 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_001829174 |
|---|
| Protein GI | 182681014 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.124481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAC CTGGTCTGGG AAATTTTGGT AATCGCTTCG CTAAGTCGAT CGAGCTTCGT
AATCGGTTGC TTTTTCTTTT GGGCGCTTTA ATTGTTTATA GGGTTGGCTG TTACGTTCCG
GTTCCTGGCG TAAATCCTGA GGCCATGCTC GCTCTGATGC AGAAGCAAGG TGGTGGTATC
GTGGACATGT TTAACATGTT TTCCGGTGGT GCTCTCCATC GCTTTAGCAT TTTTGCATTA
AATGTGATGC CTTACATTTC TGCTTCTATT GTTGTCCAGT TGGCTACTCA TATTTTCCCT
TCCCTGAAAG CAATGCAAAA AGAGGGTGAG TCAGGGCGGC GCAAGATAAC ACAGTATTCG
CGCATTGGTG CTGTTATTCT AGCTGTAATT CAGGGTGGTA GTATCGCATT AGCATTGCAA
AATCAAACAG CTCCTGGCGG CGCTGCTGTG GTATATGCTC CTGGAGCTGC TTTTGTAATG
ACTGCTATTG TTGCTTTGAC TGCAGGAACT GTTTTTCTGA TGTGGGTTGG TGAGCAGGTT
ACGGAGCGGG GTATTGGCAA TGGTGTGTCG ATGATTATTT TTGCAGGTAT CGTTGCTGGC
CTGCCTGGGT CTGTGTTGCA AACAATTGAT GCTTTCCGTA GCGATGCATT GAGTTTGATC
TCCTTATTGA TAATTGTTTT TATTGTTTTA TCATTCACTT TTTTCGTTGT TTTTGTTGAG
CGTGGCTTGC GTAGGATTAC TGTGAACTAT GCTCGGCGTG TTGAGGGTCG TAATTCTTAT
ATGAATAAAA GTTCTTTTTT GCCTCTCAAG CTTAATATGG CAGGTGTTAT TCCCCCTATT
TTCGCCTCTA GTATTTTAGC CTTTCCTGTT ACCTTATCAA TGTGGTCTGG GCAAGCTTCT
TCTAATACTC TTTTTGGTGC TTGGTTGCAG CGCGTTTCTA GTGCTTTAGG TCCGGGTGAG
CCTTTGCATA TGATTCTTTT TGCTGTTCTG ATAATAGGCT TTGCTTTTTT TTATACAGCT
CTTGTGTTTA GTTCGCAGGA AACTGCTGAT ATTCTTAAAA AGTCTGGTGC ATTGATTCCT
GGAATCAGGC CTGGTAAGGC TACTTCCGAT TACGTTGATG GGGTTTTGAC TCGTTTGACT
GCGGTAGGAT CTTTGTACTT AGTTATTGTA TGTTTGTTGC CAGAATTCAT GCAGTCCAGG
ATGGGCGCTT CCTTTCATTT CGGTGGCACT TCTTTGCTGA TTGCTGTTGT GGTTGTTATG
GATTTTATTT CTCAAATACA AGTTCATCAA GCCTCTAACC AATATGATGG TGTGAGTTTT
TTTAATAAAG CTAATTTGAA AGGTGTTTCA AAAAAGCGTC GCTTTGTGAA TTAA
|
|---|
| Protein sequence | MSQPGLGNFG NRFAKSIELR NRLLFLLGAL IVYRVGCYVP VPGVNPEAML ALMQKQGGGI
VDMFNMFSGG ALHRFSIFAL NVMPYISASI VVQLATHIFP SLKAMQKEGE SGRRKITQYS
RIGAVILAVI QGGSIALALQ NQTAPGGAAV VYAPGAAFVM TAIVALTAGT VFLMWVGEQV
TERGIGNGVS MIIFAGIVAG LPGSVLQTID AFRSDALSLI SLLIIVFIVL SFTFFVVFVE
RGLRRITVNY ARRVEGRNSY MNKSSFLPLK LNMAGVIPPI FASSILAFPV TLSMWSGQAS
SNTLFGAWLQ RVSSALGPGE PLHMILFAVL IIGFAFFYTA LVFSSQETAD ILKKSGALIP
GIRPGKATSD YVDGVLTRLT AVGSLYLVIV CLLPEFMQSR MGASFHFGGT SLLIAVVVVM
DFISQIQVHQ ASNQYDGVSF FNKANLKGVS KKRRFVN
|
|---|
| |