Gene XfasM23_0450 details

Gene Information

• Locus tag: XfasM23_0450
• Symbol: rpsE
• ID: 6203213
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 544807
• End bp: 545346
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 641701984
• Product: 30S ribosomal protein S5
• Protein accession: YP_001829171
• Protein GI: 182681011
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.948242
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAG AACGTTCACA ACGAAGTCGA GATCGTTCTC GTGAAGAAAA AATCGATGAT 
GGTATGATAG AAAAGCTGGT TGCTGTCAAT CGTGTCAGTA AAACAGTTAA GGGTGGGCGT 
CAATTTACTT TTACTGCTTT GACTATTGTA GGTAACGGTG AAGGTAGTGT TGGCTTTGGT 
TATGGAAAAG CGCGTGAAGT TCCTGTCGCT ATTCAAAAAT CAATGGAGTA TGCTCGTAAA 
AGGATGTCTA ATGTGAGTTT AAATAACGGT ACTCTTTGGC ATCCTGTGAA GGCTAACCAC 
GGTGCTGCTT CTGTCTTCAT GAAGCCTGCA TCGGAGGGTA CAGGTGTTAT TGCTGGTGGT 
GCTATGCGTG CTGTATTAGA GGCGGTTGGC GTGAAAAATG TTCTTGCTAA AGCTATTGGT 
TCTCGTAATC CGATTAATCT AGTGCGTGCT ACATTAAAGG GTTTGGAGGA CATGCAATCA 
CCGACTCATA TTGCTCTCAA GCGTGGTAAG AATGTTAGAG ACTTTAGCCA TGGTTCATGA 

 

Protein sequence

MAEERSQRSR DRSREEKIDD GMIEKLVAVN RVSKTVKGGR QFTFTALTIV GNGEGSVGFG 
YGKAREVPVA IQKSMEYARK RMSNVSLNNG TLWHPVKANH GAASVFMKPA SEGTGVIAGG 
AMRAVLEAVG VKNVLAKAIG SRNPINLVRA TLKGLEDMQS PTHIALKRGK NVRDFSHGS