| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0398 |
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| Symbol | lysS |
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| ID | 6202710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 494199 |
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| End bp | 495719 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641701932 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001829120 |
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| Protein GI | 182680960 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.575675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGC ATCTCCCTGC GTCGCAGGTG TCCTTTGACG AGAACGCGCT GATTGCCGAG
CGCCGTGCAA AACTTTTAGC ACTACGTGCG CAAGGCGTGG CTTATCCGAA TGATGTCAAA
CGCGAGCATT ATGCTGCTGA TGTGCAGGCA GCATTTGCCA ACGTCGAGAC ATGGACTGCT
GAGACCCTGG AGGCGTCAAG CCATCGTGTA CGTATGGCTG GCCGATTGAT GGCTAAGCGT
CTCATGGGCA AGGCCAGCTT TGCTCAGATT CAGGACGAGT CTGGCCGCAT CCAGCTGTTA
ATACAGAGTA ACGTGCTTGG TGAGGACAGC TATGCCGCAT TCAAGGTGTT GGATGTTGGC
GACATCATTG CTGTTGAAGG AGGATTGACC CGCACCAGAA CGGGCGAGCT GTCGGTCAAG
GTGAATGTTT TGCGACTTTT GACGAAGGCG TTACGTCCAT TGCCTGACAA GTGGCACGGG
CTGACTGATG TGGAGCAGCG CTACCGCCAG CGCTATGTTG ATCTTATTGT GACTCCAGAA
TCGCGTGAGA TCTTCATCAA ACGCTCCAAG ATCATTCGTG CGCTGCGTAC TTGGCTGGAT
GCGCGTCTTT TCTTGGAAGT AGAGACGCCG ATGATGCATT ACATCCCAGG AGGTGCTGCG
GCTAAGCCGT TTGTGACCTA CCACAATGCC TTGGATTTAG AGTTATATCT GCGCGTGGCC
CCAGAGTTGT ATCTCAAGCG TTTGGTCGTG GGTGGGCTGG AACGGGTTTA CGAGATTAAC
CGCAACTTCC GTAACGAGGG GGTGTCGACC CGGCACAACC CCGAATTTAC GATGCTTGAG
TTATACGAGG CCTATTCCAC CTACCATGAG GTCATGGATC TGGCTGAGAC GATGATCCGT
GATACTGCAC AGTCTGTGCT GGGCACGACC CAGGTGATTT GGGACGGTGC TCAGATTGAT
CTGGGTCCGA TATTCCGGCG TTGGCGCATG GATGAGGCAG TTTGCCATCA TAATCCTGAG
ATGAGCGTTG CCGAGTGTAC CGATCGTGAT GCATTGCTCC TTCACTGTGA GAGACTCAAG
ATCAAGGTTA AATCGTCCTA CGGTTGGGGT CGATTGCTCT TGAGTATTTT TGAGGCGACT
GTTGAGCATA CGTTGATCCA GCCGACCTTC ATTACGGATC ATCCGGTTGA AATCTCTCCT
TTAGCGCGCG AAAGCGACAT CGAATCAGGG TATACCGATC GCTTCGAACT GTTCATCAAT
GGGAAGGAAA TCGCCAACGG TTTCTCGGAA TTGAACGATC CGGAGGAGCA GGCGATGCGC
TTCCAAAAGC AGGTTGAAGC CAAAGAAGGG GGGGATGATG AGGCCATGTA CTACGATGCC
GACTATATTC GCGCTTTGGA GTATGGGATG GCGCCAACCG GAGGGTTAGG GATTGGTGTT
GATCGACTGG TGATGCTGCT GACCGGTAGC ACCTCAATCC GCGATGTGCT GTTATTCCCT
TATATGCGTC CAGAACGTTA A
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| Protein sequence | MTEHLPASQV SFDENALIAE RRAKLLALRA QGVAYPNDVK REHYAADVQA AFANVETWTA
ETLEASSHRV RMAGRLMAKR LMGKASFAQI QDESGRIQLL IQSNVLGEDS YAAFKVLDVG
DIIAVEGGLT RTRTGELSVK VNVLRLLTKA LRPLPDKWHG LTDVEQRYRQ RYVDLIVTPE
SREIFIKRSK IIRALRTWLD ARLFLEVETP MMHYIPGGAA AKPFVTYHNA LDLELYLRVA
PELYLKRLVV GGLERVYEIN RNFRNEGVST RHNPEFTMLE LYEAYSTYHE VMDLAETMIR
DTAQSVLGTT QVIWDGAQID LGPIFRRWRM DEAVCHHNPE MSVAECTDRD ALLLHCERLK
IKVKSSYGWG RLLLSIFEAT VEHTLIQPTF ITDHPVEISP LARESDIESG YTDRFELFIN
GKEIANGFSE LNDPEEQAMR FQKQVEAKEG GDDEAMYYDA DYIRALEYGM APTGGLGIGV
DRLVMLLTGS TSIRDVLLFP YMRPER
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