Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0396 |
Symbol | |
ID | 6202700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 490418 |
End bp | 492226 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641701930 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001829118 |
Protein GI | 182680958 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCAAGA TTATTCGCCG TCTCTCTTTG CCGCTGGTTG TTTGGCCTGA CAATGTGCCG CCATTGCTAC GACGTGTGTA CACGGCACGT GGTTGTGCTG ATCCGGTGAC GGCGCAACCC TGTCTCGCTC AGTTGTTGTC ACCCGCCATG CTGAGCAACA TGCAGGCAGC CACTGTATTG CTGACTGAGG TCATCAAGGC CAATGGGCGT ATTCTGGTTG TCGGTGATTT TGACTGCGAT GGTGCAACTG CCTGTGCGGT TGCGGTGCGT GGTTTGCGTT TGCTTGGCGC GCGTAACGTG ATGCATGCGG TCCCCAATCG TATGGTGCAT GGTTACGGTT TGTCGTCGGC ATTGGTTGAG GAGTTGGCAC CGTTGCAGCC AGCGTTGCTT GTTACGGTGG ATCACGGCAT TGCTTGCCAT GCTGGCATTG CTGCTGCTAA GGCCCGCGGT TGGAAGGTGT TGGTGACTGA TCACCATTTG CCGGGTGAAA CCTTGCCAGC AGCCGATGTC ATTGTTAATC CGAATCTGCC TGGCGATTTG TTTCCGAGTA AAACGCTGGC GGGTGTCGGG GTGATCTTTT ATGTACTGCT TGCGCTGCGT GCGCGTCTTT ATCCTGCTGC TCGTGCTGAG TGCGAAGGTC AAGAAACGCG TATTCACAGT TCTATTTCTC AGAAAAACCG TCCTGATTTG ACGTCCTTAC TGGATTTAGT TGCGGTCGGG ACGGTTGCCG ACTTGGTGCC TTTAGATACG AATAATCGTG CTTTGGTTGC TGCCGGCTTG CGCCGGTTGC GTCGTGGTCA AGGGTGTCTC GGACTACGCG CGTTGATCGA GGTCAGTGGC CGTGATGAGT CGCAATTGAC CGCTACTGAT ATTGGTTTTG CATTGAGTCC GCGTCTGAAC GCTGCGGGAC GGTTGGAGGA TATGGCGTTG GGCATTGAAT TGTTGCTCAC TGAGGATTGG ACTCGCGCGC GTGCTATCGC AGCCATGCTT GAGGAGATTA ATGCCGCACG CCGTGTGGTA CAGCAGGGTA TGAGTGACGA TGCTGAGCAG GCAGTAGCGC AAGCGATGGC GCAGTCAGGC GGTGTGTTGC CAATGGCGGT GTGCCTGTTC GATCCGGACT GGCATCCAGG AGTGATTGGT TTGGTCGCGT CCAAGATGAA GGACAAAATG CACCGTCCGG TGGTGGCTTT AGCACCGGCT GAGCCGGGAG GTACAGTGTT GCGAGGGTCG GCACGGTCGA TCCCAGGACT GCATATCCGC GATGTATTGG TGGCGCTCGA CAGTGGTTAT CCCGGGATGA TTCAGAAATT TGGAGGTCAT GCGATGGCGG CCGGCTTGAC ACTGGATGCG GAGGTGTTGC CGGTGTTCGA ACGTGTATTT CGTGCCCAAG TTGAGATGAT GGTTGATAAG AATGTGTTGC AGGCTGAGTT GTATAGCGAT GGTGAATTGG CGGCCGATGA GCTGGACGCA TTACATGCGC GGGCATTGCG GCTGGGTGGG CCATGGGGAC AGGGGTTTCC AGAGCCATTG TTTGATGGAG AGTTTGAAGT GCTGCAATGG CGTGTCCTCA AGGAGCGTCA TTTGAAAATG GAGGTGCGTT ATTCAGGACG GCATGACGCT CTGAACGCTA TTTATTTCAA CGGCTGGCAG GGTGATCCTC CAGCACGGCG ATTGCGTTTG GCATATCGGT TGGTTTGCGA CGATTACCGC GGTGGTGATG CGATTCAGTT GATCGTGGAA TATGCGGAAG TGATTGAATG TGATGTATTG GGTTCCCAAG CAATTTCCAG TGGCCTACTT GATCCTTAG
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Protein sequence | MPKIIRRLSL PLVVWPDNVP PLLRRVYTAR GCADPVTAQP CLAQLLSPAM LSNMQAATVL LTEVIKANGR ILVVGDFDCD GATACAVAVR GLRLLGARNV MHAVPNRMVH GYGLSSALVE ELAPLQPALL VTVDHGIACH AGIAAAKARG WKVLVTDHHL PGETLPAADV IVNPNLPGDL FPSKTLAGVG VIFYVLLALR ARLYPAARAE CEGQETRIHS SISQKNRPDL TSLLDLVAVG TVADLVPLDT NNRALVAAGL RRLRRGQGCL GLRALIEVSG RDESQLTATD IGFALSPRLN AAGRLEDMAL GIELLLTEDW TRARAIAAML EEINAARRVV QQGMSDDAEQ AVAQAMAQSG GVLPMAVCLF DPDWHPGVIG LVASKMKDKM HRPVVALAPA EPGGTVLRGS ARSIPGLHIR DVLVALDSGY PGMIQKFGGH AMAAGLTLDA EVLPVFERVF RAQVEMMVDK NVLQAELYSD GELAADELDA LHARALRLGG PWGQGFPEPL FDGEFEVLQW RVLKERHLKM EVRYSGRHDA LNAIYFNGWQ GDPPARRLRL AYRLVCDDYR GGDAIQLIVE YAEVIECDVL GSQAISSGLL DP
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