| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0355 |
|---|
| Symbol | |
|---|
| ID | 6202081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 453870 |
|---|
| End bp | 454559 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641701889 |
|---|
| Product | late control D family protein |
|---|
| Protein accession | YP_001829077 |
|---|
| Protein GI | 182680917 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3500] Phage protein D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCG AACATGGCAT GACCTGGGCG ATCTCCCCGT CGCTCACAGG CGTCGCGCTA
CCCCACATTG ATCAGACAGA AGAATCAGAT ATCAACGTCC TGCTACGGCT AGCACAGCGT
TACGATGCGA TTGCTAAACC TGCCGGAGGT CGACTGATCT TTGCCAAACG CGGCGAAGCT
AAAAGCGTCA CAGGCATTGA TATGCCACGC ATCACCTTAA CACCTGATGA GATTGCCTCC
TGGCAAATGA CCTACGCAAC GCGGGACAGC CCCGGCACAG TGATTGCCTT CTATCGCCTG
GCACGCCGCG CTGAACTGCA TCAAGTCAGT GTCGGTGACG GGCATCCCGT TCACCGCATC
AAACAATACC TGCCTGATGC CGCCGCCGCC ATCGCTGCTG CTCGGGGTGA ACTCTCACGC
CGCGCCCGCG CTGAAACCAA ACTCACTCTA GAGATGGCAG GGCGTGCGGA GCTGTCCGCA
GAAGCCGTCT TGACACTCAA CGGCTGGCGG GAAGGAGTGA ATGGTGATTG GCTCGTCACC
CGTGTGCAAC ATGGCCTAGA CAAAAACGGC TACCGATGTA GCATCGAAGC CGAGCGGCCC
AACAACCATC CAGATGTTGC TGCCGCCATC AACACGCAAG TACGCGATCA AGTCGTACGC
CCGTCCCGCA CCCATCATCA GAAAACATAG
|
|---|
| Protein sequence | MAAEHGMTWA ISPSLTGVAL PHIDQTEESD INVLLRLAQR YDAIAKPAGG RLIFAKRGEA
KSVTGIDMPR ITLTPDEIAS WQMTYATRDS PGTVIAFYRL ARRAELHQVS VGDGHPVHRI
KQYLPDAAAA IAAARGELSR RARAETKLTL EMAGRAELSA EAVLTLNGWR EGVNGDWLVT
RVQHGLDKNG YRCSIEAERP NNHPDVAAAI NTQVRDQVVR PSRTHHQKT
|
|---|
| |