| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0353 |
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| Symbol | |
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| ID | 6202057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 450699 |
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| End bp | 452447 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641701887 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_001829075 |
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| Protein GI | 182680915 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.693994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTATG CCACGCCCTG GCGGACGTAC CGTCGCTTGC TGTCGTATGC GCGGGAGTAT
CGTTGGTTAC TCGTTGTTGC TGCATGTGGT GCTTTACTTG AGGCAGTTGC TGGTTCTACC
TTTCTGGCGT TGATGAAGCC CATCACCAAC GAAACCTTTA TCGAGCGAAA CCGTGAGGTG
GCCCTGTGGC TGCCTCTTGG AATTGTCGGT TTGTTTTTGT TACGCGGCAT TGCTGGCTAT
ATCACTGATA TGGCGATGGG CCGCGCCGCG CGTAGCATTG CTCGGGATTT TCGTGTGTGT
GTCCTGACCA AATATTTTCG TTTGCCTGGT AGCCGTTTTG ACGGTGAGCC AGTGGCTTCG
ATGTTGGTGC GACTCGGTTC AGACAGTGAG CAAGTTGCGC ATGCGGTTAT CGACGCGATG
AAGGTGATGG TGCAGCAGAC ACTTCAGGTG ATTGGTGCGT TGGTTGTGAT GTTGTGGTAC
AGCTGGACGG TCACGCTCGC CATCCTTTTG GTCGCTCCGT TGCTGGCTTG GGTCATGCAG
CGGGTTGCTA AGCGTTACCG TCGTATCAGC CATCACATCC AAGAGAGTAA TGCGCAGCTC
ATGCAAGCTG CCGATCAAGC GTTAAGCAAC TACCAGGACG TTAAAGTGTA TGCCGCGCAA
GAGAGCGAGT TGGAGCGCTA TGCTCGGTTG GCCAATATCA ATTTGGGTTT GGCGGTAAAG
GTTGAGTCGA CACGTAGTAT CTCTTCGGCG GCGGTTCAAT TGCTTGGTGC GGTTGGGTTG
GCAATGTTGT TGCTCATTGC TGGCCATGAA GCTTTGGCCG GTCGCCTCAG TCCAGGCGAT
TTTGTCTCGC TGATGACTTC AATGATCGCG GTTATTCCCG CGTTGAAACA GTTGACCAAT
GTACAGAACA TGTTGCAGAG CGGTATTGCT TCTGCACAAC GTCTGTTCTC GGTACTAGAT
AGTCCTGATG AGCTTGATAC TGGCAGACGA CCGTTGGGGC GTGCCAGAGG ATTAATTGAG
TTCCGCGGGA TCACCGCACG CTATCCTGGT CGGTCTGCTC CTGTGCTGGA TAGTGTCAGC
TTTGTTGCTG CACCGGGCAC GGTCACTGCG ATTGTTGGTC GTTCAGGAAG CGGTAAGTCA
AGTTTAATCA AGTTGATTCC GCGTTTTTAC GAGCCGGAGT CTGGGCAGAT ATTGTTGGAT
GGCCATCCAT TACAGGATTA TCTTTTAGCT GATCTGCGCC GTCAGATTGC ATTGGTAGGG
CAGCAGGTCA TGTTGTTCGA TGGCAGCATC GCGGATAATA TTGCTTATGG TGAGATGCGT
CAGGTCGTTT CTGAGGAGAT TGAACGTGTC GTGGTTGATG CAAACGCTCA GGATTTTGTG
AATCAACTTC CAGAGGGATT ACAGTTTCAG GTTGGGGTTA AGGGGGGGCG TCTTTCTGGG
GGACAACGTC AGCGTTTGGC CATTGCGCGC GCGATGCTGA AGGATGCGCC GATTCTTATC
CTGGACGAGG CCACGGCTGC GCTTGATAAC GAATCTGAGC GCTTAGTGCA GGATGCGTTG
CAGCGCTTGA TGCCGGAGCG CACCACACTT GTGATTGCGC ATCGACTGTC AACGATCAAG
CATGCGGATC AGGTGTTGGT GATGGACCAG GGGCGCATCA TTGAGTCTGG TACCCATGTC
GATCTGTTGG CACGTGATGG GTTGTACGCT TATTTGTACA GCATGCAATT TCGCGAACGT
CCAACATGA
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| Protein sequence | MRYATPWRTY RRLLSYAREY RWLLVVAACG ALLEAVAGST FLALMKPITN ETFIERNREV
ALWLPLGIVG LFLLRGIAGY ITDMAMGRAA RSIARDFRVC VLTKYFRLPG SRFDGEPVAS
MLVRLGSDSE QVAHAVIDAM KVMVQQTLQV IGALVVMLWY SWTVTLAILL VAPLLAWVMQ
RVAKRYRRIS HHIQESNAQL MQAADQALSN YQDVKVYAAQ ESELERYARL ANINLGLAVK
VESTRSISSA AVQLLGAVGL AMLLLIAGHE ALAGRLSPGD FVSLMTSMIA VIPALKQLTN
VQNMLQSGIA SAQRLFSVLD SPDELDTGRR PLGRARGLIE FRGITARYPG RSAPVLDSVS
FVAAPGTVTA IVGRSGSGKS SLIKLIPRFY EPESGQILLD GHPLQDYLLA DLRRQIALVG
QQVMLFDGSI ADNIAYGEMR QVVSEEIERV VVDANAQDFV NQLPEGLQFQ VGVKGGRLSG
GQRQRLAIAR AMLKDAPILI LDEATAALDN ESERLVQDAL QRLMPERTTL VIAHRLSTIK
HADQVLVMDQ GRIIESGTHV DLLARDGLYA YLYSMQFRER PT
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