Gene XfasM23_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0348 
Symbol 
ID6202025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp444820 
End bp446061 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content53% 
IMG OID641701882 
ProductLolC/E family lipoprotein releasing system, transmembrane protein 
Protein accessionYP_001829070 
Protein GI182680910 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID[TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATC CGCTTTCTGT TGCGATCGGT TTGCGTTATC TGCGTGCCAA GCGGCGCAAT 
GGTTTCATCT CGTTTATTTC AATGGCTTCC ATCCTGGGCA TTGCTCTGGG AGTGACTGTC
TTGATTACTA CCTTGGCAGT GATGAGCGGC TTTCAGAAAG AGATTCGTGA CCGATTGTTG
CAAATGTCTG CACACGCAAC GGTGAGTGCG CAGGGAGCAC CGATGCATGA TTGGCAGCAT
GCAGTTGCGT TGGCGATGAC TGATCCCCGC GTCGCTGGTG CTGCGCCGTA CATCGAGAGT
GAAGCGTTGC TCCAGGGGGA GCGTCATCAG CCTGCGATGA TGCGTGGCAT CGTGCCCAAC
CAGGAAACTA AGGTTTCGGT GCTGGCGCAG AAATTGAAGG TTGGTTCAAT TGATAGTCTC
AAGCCCGGTG AGTACAACAT CTTGCTTGGT AAGGAGTTAG CCTTGTGGTT AGGCGTTGAT
GTCGGCGACA GCGTGATCGT GCTCCTCAGT CAAACTCAGA CCACTCCAGT GGGGACGATG
CCACGGATGA AGCGCTTCAC CGTCAGTGGC TTGTTTGAAG TCGGCTACAA CGAAATCGAC
CGTGGCTTAG CGGTGGTCAA TATGGAGGAT ATGCAGAAGA TCATGCGGAT GGACGGTGTG
ACCGGCGTGC GTTTGAAATT GCACGATATG GATCATGCCT GGGACGTTGC GAGTGACTTG
GCGGTCCGCC TGAATGGCCC CTATCTGGTG AGCGACTGGA CACGCGAAAA TGCCAATCTG
TACAGTTCAT TGAAGATGGA AAAAACGGTG ATGGGCATTT TGCTCTCCCT GATCATCGCG
ATGGGCGCCT TCAACTTGGT GTCCTCGCAG GTGATGTTGG TCACTGATAA GCAAGCCGAT
ATCGCCATCT TGCGCACCTT GGGTTTGTCG CCAGCAGGGG TGATGCGAGT ATTTATGGTG
CAGGGGTCGT TGATTGGCAT CATCGGTACC CTCTCTGGCG TGATCGGTGG TGTGGTGCTG
ACTTGGAATC TGGAGCGAAT CCTGAAATTG ATTGAATCCA CGTTCAACAT TACCCTGCTT
CCGGAGGATG TGTATTACAT CACTGGCCTG CCGACCGATA TGCAGTTCCC TGATGTGGTA
GTGATTACTC TGATGGCGTT GGCAATGAGT TTCATTGCCA CCTTGTACCC GGCGTGGCGT
GCCGCCAGGA TTCAGCCAGC AGAGGCGCTG CGTTATGAAT GA
 
Protein sequence
MFNPLSVAIG LRYLRAKRRN GFISFISMAS ILGIALGVTV LITTLAVMSG FQKEIRDRLL 
QMSAHATVSA QGAPMHDWQH AVALAMTDPR VAGAAPYIES EALLQGERHQ PAMMRGIVPN
QETKVSVLAQ KLKVGSIDSL KPGEYNILLG KELALWLGVD VGDSVIVLLS QTQTTPVGTM
PRMKRFTVSG LFEVGYNEID RGLAVVNMED MQKIMRMDGV TGVRLKLHDM DHAWDVASDL
AVRLNGPYLV SDWTRENANL YSSLKMEKTV MGILLSLIIA MGAFNLVSSQ VMLVTDKQAD
IAILRTLGLS PAGVMRVFMV QGSLIGIIGT LSGVIGGVVL TWNLERILKL IESTFNITLL
PEDVYYITGL PTDMQFPDVV VITLMALAMS FIATLYPAWR AARIQPAEAL RYE