| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0344 |
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| Symbol | sdhA |
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| ID | 6201970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 441426 |
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| End bp | 443216 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641701878 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001829066 |
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| Protein GI | 182680906 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTT ATACAATTAC CGAACACAAA TATGACATGG TTGTCGTTGG TGCTGGCGGT
GCTGGTCTAC GTGCCACGTT CGGTTTGGCT CATAAAGGCT TACAGACTGT CTGTCTGACA
AAAGTATTCC CGACGCGTTC GCATACCGTC GCTGCGCAAG GTGGTATCTC CGCTGCGCTT
GGTAACATGG GGGAGGATGA TTGGCGTTAC CATTTTTATG ACACCATCAA AGGGTCAGAC
TGGCTGGGTG ACCAGGATGC GATTGAGTAC ATGTGCCGTG AGGCAATCCC GGCTGTGATC
GAACTAGAAC ACTATGGTGT TCCGTTCTCT CGTACTGCAC AAGGCAAGAT TTACCAGCGG
CCATTTGGTG GGATGACGAC ACGTTACGGT GAGGGGCCGC GGGCAGAGCG TACCTGCGCT
GCAGCTGATC GAACCGGCCA TGCGATGTTA CATACCTTGT ACCAGCAAGC ATTGGCGCAC
GACGCGCGTT TCATGATTGA GTACTTTGCA CTTGATCTGA TCTTCGACAG CGAGGGTTTG
TGTCGTGGCG TGTTGGCGTT GGACATGGCC GAGGGATCCT TGCACCTGTT TCGTGCCCAT
GGAGTCGTGT TGGCGACCGG TGGCTACGGT CGCACGTACT TCAGTGCAAC TTCTGCTCAT
ACCTGTACTG GTGACGGTGG TGGCTTGGTG ATGCGTGCCG GTTTACCGAT GCAGGATATG
GAGTTTGTGC AGTTCCATCC CACAGGAATC TATGGGGCTG GCTGCCTCAT CACCGAAGGA
GTGCGTGGTG AGGGAGGAAT CTTGCGTAAC TCTAACGGGG AGCGCTTCAT GGAGCGCTAT
GCACCTCACT ACAAGGATCT GGCCTCTCGT GATGTGGTGA GTCGCTCAAT GATTATTGAG
ATCAGGGAGG GGCGCGGCGT TGGTGAACAC AAAGACCATA TATTGCTTGA TTTGACTCAC
TTGGGTCCGA GCATGATCCA AGAAAAATTG CCTGGCATTG CCGAGAGTGC GCGTATCTTC
GCTGGCGTGG ATGTGACCAA GCAGCCGATT CCAGTGCTGC CAACAGTGCA TTACAACATG
GGTGGTATTC CAACCAATTA CCATGGCGAA GTGGTGCGTA AAGTTGGTAA TGATCCTGAT
GCAGTGGTGC CGGGGCTATA TGCGGTTGGT GAAGCGGCCT GTGTATCGGT GCACGGTGCC
AATCGTTTGG GATCGAATTC GTTGCTTGAT TTGGTGGTAT TCGGTCGTGC GGTTGCCAAT
CGTTGTTCCG AAACAATCAA ACCAAATCAG CCGCATAAGG TATTGCCCTC GGATAGTTGC
GACAAGGCAC TGGGCTTGCT TGATAAACTT CGCCATGCTG ATGGTTCCAC GCCGACAGCG
GTGATTCGTG ACACGATGCA ACGTACCATG CAATCTGATG CTTCGGTGTT TCGTACGAGT
AAGACCTTGC AAGAAGGGTG CGAAAAGATG AATGAAATCT TTGCCTTGTT TGATGACGTC
AAGGTTTCTG ATCGTTCACT TGTTTGGAAT TCGGATTTGA TAGAAACCTA CGAGCTCCAC
AATTTGCTGT TAAACGCACT GGCTACGATT AACTCGGCTG AACAGCGCAA AGAGAGCCGT
GGTGCTCATG CGCATGAAGA TTATCCAGAT CGCGATGACG AGAATTGGTT GAAACACACA
TTGGTCAGTG TCGACGAAAA GGGCTCATGC AGTTTTGACT ACCGCCCTGT GCACATGTAC
ACGCTCAGCA AAGACGTGGA TGTGATACCT CCTAAGCCGC GCGTCTATTG A
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| Protein sequence | MSAYTITEHK YDMVVVGAGG AGLRATFGLA HKGLQTVCLT KVFPTRSHTV AAQGGISAAL
GNMGEDDWRY HFYDTIKGSD WLGDQDAIEY MCREAIPAVI ELEHYGVPFS RTAQGKIYQR
PFGGMTTRYG EGPRAERTCA AADRTGHAML HTLYQQALAH DARFMIEYFA LDLIFDSEGL
CRGVLALDMA EGSLHLFRAH GVVLATGGYG RTYFSATSAH TCTGDGGGLV MRAGLPMQDM
EFVQFHPTGI YGAGCLITEG VRGEGGILRN SNGERFMERY APHYKDLASR DVVSRSMIIE
IREGRGVGEH KDHILLDLTH LGPSMIQEKL PGIAESARIF AGVDVTKQPI PVLPTVHYNM
GGIPTNYHGE VVRKVGNDPD AVVPGLYAVG EAACVSVHGA NRLGSNSLLD LVVFGRAVAN
RCSETIKPNQ PHKVLPSDSC DKALGLLDKL RHADGSTPTA VIRDTMQRTM QSDASVFRTS
KTLQEGCEKM NEIFALFDDV KVSDRSLVWN SDLIETYELH NLLLNALATI NSAEQRKESR
GAHAHEDYPD RDDENWLKHT LVSVDEKGSC SFDYRPVHMY TLSKDVDVIP PKPRVY
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