Gene XfasM23_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0340 
Symbol 
ID6201955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp439249 
End bp440166 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content55% 
IMG OID641701874 
Productputative aminomethyl transferase 
Protein accessionYP_001829062 
Protein GI182680902 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGTCTA TCCCTATAAT CCTCTTCAAA CCGGCTGCGA TTCTATTCCT CTCCCCAGTG 
ACTGACAACC TCCAAAGCAA CGGACAGACA CTCTTCCCAC TGCCATCGTA TGAAATGTTG
CGCATTTCAG GCGCAGATAC ACTGAGTTTC GCACATGCCC AATTCAGCAG CGATGCACAA
GGCCTAGCCA TCGGCAAGTG GCACTGGAGT GCTTGGCTAA CTCCGAAAGG ACGTGTCACT
GCATTGTTCG CCTTATATCG TCCTGCTGAA AACGAATTAC TGTTGATCCT ACCCGATGGA
GAAGCAGTGA TGATGGCCAC CCAACTGCAA CGCTATATCT TCCGACGTAA AGTACAGATC
GCTGTGGAGC GGAATCTCAT TACAACCGCA ACTTACGACA CACCGGTACA CGCCACAGGT
ACGCAAGCAG CGCAACTTGA CGGAATCACC GAATTGGACG TTAGCGGAAT CACTCTGCCA
AGACGACTAC TGCTAGTACC AGCTGCCGCC ATGCCACCAC GGGTCCCCGC ATTCGAAGCG
CAATGGCGCG CGGCAGATTT ACGATTGGGG CTACCACGCC TGGACGCAAG CCAGCGCGAT
CAATGGACAC CACAGCAGAT CGGCCTAGAC GGGTTGAATG CCTACAGCAT ACGCAAAGGT
TGCTATCCCG GGCAGGAAAT CGTTGCACGT ACTCATTTCC TCGGCAAAGC GAAACGCCGC
GCTCAGCTAC TGGCCATCAA TACTCATGTA CAGCCAGGGG AAACGGTCAA AAGCGCAGAG
GGCGACATCG GCCAGGTGGC CAGCGTTGCA GAGGGTCTAG CACTCGCAGT ACTTCCAATA
GACACAGAAT ACGGTGAACT CAGAGTCGCC GGAACACTGG CAACACCCCT TCCTTTCGTC
GCCGGGCTTG CACGCTGA
 
Protein sequence
MRSIPIILFK PAAILFLSPV TDNLQSNGQT LFPLPSYEML RISGADTLSF AHAQFSSDAQ 
GLAIGKWHWS AWLTPKGRVT ALFALYRPAE NELLLILPDG EAVMMATQLQ RYIFRRKVQI
AVERNLITTA TYDTPVHATG TQAAQLDGIT ELDVSGITLP RRLLLVPAAA MPPRVPAFEA
QWRAADLRLG LPRLDASQRD QWTPQQIGLD GLNAYSIRKG CYPGQEIVAR THFLGKAKRR
AQLLAINTHV QPGETVKSAE GDIGQVASVA EGLALAVLPI DTEYGELRVA GTLATPLPFV
AGLAR