Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0340 |
Symbol | |
ID | 6201955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 439249 |
End bp | 440166 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641701874 |
Product | putative aminomethyl transferase |
Protein accession | YP_001829062 |
Protein GI | 182680902 |
COG category | [R] General function prediction only |
COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGTCTA TCCCTATAAT CCTCTTCAAA CCGGCTGCGA TTCTATTCCT CTCCCCAGTG ACTGACAACC TCCAAAGCAA CGGACAGACA CTCTTCCCAC TGCCATCGTA TGAAATGTTG CGCATTTCAG GCGCAGATAC ACTGAGTTTC GCACATGCCC AATTCAGCAG CGATGCACAA GGCCTAGCCA TCGGCAAGTG GCACTGGAGT GCTTGGCTAA CTCCGAAAGG ACGTGTCACT GCATTGTTCG CCTTATATCG TCCTGCTGAA AACGAATTAC TGTTGATCCT ACCCGATGGA GAAGCAGTGA TGATGGCCAC CCAACTGCAA CGCTATATCT TCCGACGTAA AGTACAGATC GCTGTGGAGC GGAATCTCAT TACAACCGCA ACTTACGACA CACCGGTACA CGCCACAGGT ACGCAAGCAG CGCAACTTGA CGGAATCACC GAATTGGACG TTAGCGGAAT CACTCTGCCA AGACGACTAC TGCTAGTACC AGCTGCCGCC ATGCCACCAC GGGTCCCCGC ATTCGAAGCG CAATGGCGCG CGGCAGATTT ACGATTGGGG CTACCACGCC TGGACGCAAG CCAGCGCGAT CAATGGACAC CACAGCAGAT CGGCCTAGAC GGGTTGAATG CCTACAGCAT ACGCAAAGGT TGCTATCCCG GGCAGGAAAT CGTTGCACGT ACTCATTTCC TCGGCAAAGC GAAACGCCGC GCTCAGCTAC TGGCCATCAA TACTCATGTA CAGCCAGGGG AAACGGTCAA AAGCGCAGAG GGCGACATCG GCCAGGTGGC CAGCGTTGCA GAGGGTCTAG CACTCGCAGT ACTTCCAATA GACACAGAAT ACGGTGAACT CAGAGTCGCC GGAACACTGG CAACACCCCT TCCTTTCGTC GCCGGGCTTG CACGCTGA
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Protein sequence | MRSIPIILFK PAAILFLSPV TDNLQSNGQT LFPLPSYEML RISGADTLSF AHAQFSSDAQ GLAIGKWHWS AWLTPKGRVT ALFALYRPAE NELLLILPDG EAVMMATQLQ RYIFRRKVQI AVERNLITTA TYDTPVHATG TQAAQLDGIT ELDVSGITLP RRLLLVPAAA MPPRVPAFEA QWRAADLRLG LPRLDASQRD QWTPQQIGLD GLNAYSIRKG CYPGQEIVAR THFLGKAKRR AQLLAINTHV QPGETVKSAE GDIGQVASVA EGLALAVLPI DTEYGELRVA GTLATPLPFV AGLAR
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