| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0334 |
|---|
| Symbol | |
|---|
| ID | 6203257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 431717 |
|---|
| End bp | 432376 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641701868 |
|---|
| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
|---|
| Protein accession | YP_001829056 |
|---|
| Protein GI | 182680896 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTA CTGAAACCCA AAACAAAGCC GAATCCCTGT TATACAACGC CGGCATCCTA
CCTGTTGTAA CCGTGGACAC AGTGGATCAG GCGCGCCGTG TCGTCGGCGC ACTGCTGGAA
GGCGGCCTCA CCACGATCGA ACTGACCTTA CGCACCCCAG TGGCCCTGGA AGCATTAGCA
ACTCTCAAGC GCGAACAACC AGAAATCACG ATCGGAGCAG GGACCGTACT CAACGAACAC
CAACTCCGCC AATCAATCGA CGCTGGAGCC GACTTTCTTA TTACACCAGG CACCCCTCCC
ACCTTGGCAC AGCTGCTAGC CGATGCACCA ATCCCCGCAG TACCGGGTGC GGCCACAGCA
ACAGAATTGC TCGCACTCAT GGTGTTGGGC TTCCACGTCT GCAAACTGTT TCCGGCCAAT
GTGGTGGGCG GCCTGCACAT GCTCACCAGC TTGGCCGGCC CCCTAACCAA TCTGAAACTA
TGCCCCACTG GTGGTATCAA CGAAACCAAT GCTAGCGACT ATCTGGCACA ACCCAACGTC
ATCTGCATCG GCGGCTCATG GATGGTTCCC AAAGACTGGC TCGTTCAAGG GCATTGGGAC
AACATCAAAA ACTCCTCCTC AAAGGCCGCA GCAATCATCC AACAAGCGCG CAGCCACTAA
|
|---|
| Protein sequence | MSITETQNKA ESLLYNAGIL PVVTVDTVDQ ARRVVGALLE GGLTTIELTL RTPVALEALA
TLKREQPEIT IGAGTVLNEH QLRQSIDAGA DFLITPGTPP TLAQLLADAP IPAVPGAATA
TELLALMVLG FHVCKLFPAN VVGGLHMLTS LAGPLTNLKL CPTGGINETN ASDYLAQPNV
ICIGGSWMVP KDWLVQGHWD NIKNSSSKAA AIIQQARSH
|
|---|
| |