| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0329 |
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| Symbol | |
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| ID | 6201897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 427252 |
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| End bp | 427932 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641701860 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001829051 |
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| Protein GI | 182680891 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTAT CTATTCCTTC ACGCAATCGA CCAACCTGGC TTTGGGCGGT GCCATTGCTT
TTTTTTGCTG TATTGATCGC GTTCCTGTGG TCGATCAGTA GGCCAGGCCA AGAACGCAGT
ACGCTGTGGC TGGATTGGGG AGCGCTGTCA GGTGGCTTCT CTCATGTGCC TGACATGTGG
ATTACCTCGC AGGGTGGCAG TGCGCTGCGC CTGTTTACAG CCCTGTTTCT CCATGCCGAT
TGGGCTCATT TGTTGGGTAA TCTCGTGTTT CTGCTGATCT TTGGGTTACC AGCCGAACGT
ATCCTCGGGT CGTGGCGGTT ACTGCTGCTG TTTCTGCTTG GTGGCGCACT GGCCAATTTG
GCTGCGGTGT TGACCATCGG TAGCCCGAAT CACGTGATTA TTGGTGCTTC TGGTGCCGTT
TCGGCGCTCA TTGGTAGTTA CCTGGCATTG TTTCCAGGAG CAAAGTTGGG AGTGGTGTTG
CCGTTAGGGT TGTTTCTGGA GTTTATCCGG GTTCCAGCTC CTTTCCTCAT CGGGTTTTGG
GCGTTGCTGC AGGTCGTATT TGCTTACACT GGTCCGACAT TGGTTATGGT TGCTTGGTCG
GCCCATTTGG CAGGATTTGT ATCTGGTGTT GTCTACGGAA GCTTTGTACG CGCTGCAATT
GTGCGGCGGC TGCGTCAGTG A
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| Protein sequence | MFVSIPSRNR PTWLWAVPLL FFAVLIAFLW SISRPGQERS TLWLDWGALS GGFSHVPDMW
ITSQGGSALR LFTALFLHAD WAHLLGNLVF LLIFGLPAER ILGSWRLLLL FLLGGALANL
AAVLTIGSPN HVIIGASGAV SALIGSYLAL FPGAKLGVVL PLGLFLEFIR VPAPFLIGFW
ALLQVVFAYT GPTLVMVAWS AHLAGFVSGV VYGSFVRAAI VRRLRQ
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