| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0324 |
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| Symbol | |
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| ID | 6201887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 421558 |
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| End bp | 422742 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641701855 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001829046 |
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| Protein GI | 182680886 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAC CGATCCGCAA CGTCGCCGTA CTCGGTGCCA CTGGCTCAAT TGGGGCAGCA
GCACTGGATG TGCTCGCACG CCACCCCAGA CAGTTCCACG TAAGCCTGCT AGCCGCTGGC
CAGCGCGTCG ATGCACTGTT GGCATTGTGC CGCACGTATC GTCCGGACCA TGCGGTGATC
GGCGATGCAA CGCTCTACAC CACTCTTCGC GACGGCCTGA ATGCCGCTGG TTTAGCCACC
AAAGCGTACG CTGGAGAAGC AGCATTAGCA GAACTAGTCG CCAGCACCAC ATGCGATACC
GTAGTGGCAG CAATCGTCGG AGCAGCGGGC CTCCATTCGA CACTGGCGGC AGCACGCGCC
GGAAAACGTC TGTTGCTGGC GAACAAAGAA TCGCTGGTCC TGGCCGGAAT GCTGCTGATG
CGTGAGGCCA GCATCAGTGG CGCGGAGATC ATACCGATCG ATAGCGAACA CAACGCAATT
TTTCAGTGCC TGCGTTCGCG TACTACAGAT GGCGTGCATC GGGTCACTTT GACTGCTTCT
GGCGGTCCAT TTCGTGGCCA CAACCGCACG ATGCTAGCCA AGATCACTCC CACTCAAGCA
ATGGCCCACC CAACGTGGTC GATGGGACCA AAGATATCGG TAGATTCGGC TACACTGATG
AACAAGGGCT TGGAAGTCAT TGAGGCCCAC CATTTGTTCG GGCTACCTAG CGAACAGATT
GATGTACTAG TGCATCCACA AAGTTTGGTG CACTCTCTGG TGGAGTTTAT TGATGGTTCG
ACGCTCGCTC AGTTAAGCCT GCCAGACATG CGTACCACCC TGGCAGTTGG CCTCGCCTGG
CCAGAGCGAA TCGGTTCCGG GGTGCAGGGT TTGGACTTGA TGAAGCACAA CAGGTTGGAC
TTTGAGCATC CGGATACCGA AACGTTTTCC TGTCTGCGTC TGGCACGAGA CGCCATGCAG
ACTGGCGGCA CGGCGCCTGC GGTGCTAAAT GCTGCCAATG AAATCGCTGT TTCAGCGTTT
CTTCAGGGGC GCATCGGTTT CCTAACAATT CCAGCACTGA TAGAACACGC ACTGACTACA
CTTCCTCGTT ACGAGGCAGA CACTTTGGAG ACTCTACTGA CCGTGGACAC AGAAACCCGC
CGCATCACAC ACGCAGCACT CACCCATTTC CCACTCCCTC TCTAA
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| Protein sequence | MTKPIRNVAV LGATGSIGAA ALDVLARHPR QFHVSLLAAG QRVDALLALC RTYRPDHAVI
GDATLYTTLR DGLNAAGLAT KAYAGEAALA ELVASTTCDT VVAAIVGAAG LHSTLAAARA
GKRLLLANKE SLVLAGMLLM REASISGAEI IPIDSEHNAI FQCLRSRTTD GVHRVTLTAS
GGPFRGHNRT MLAKITPTQA MAHPTWSMGP KISVDSATLM NKGLEVIEAH HLFGLPSEQI
DVLVHPQSLV HSLVEFIDGS TLAQLSLPDM RTTLAVGLAW PERIGSGVQG LDLMKHNRLD
FEHPDTETFS CLRLARDAMQ TGGTAPAVLN AANEIAVSAF LQGRIGFLTI PALIEHALTT
LPRYEADTLE TLLTVDTETR RITHAALTHF PLPL
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