| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0323 |
|---|
| Symbol | |
|---|
| ID | 6201881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 420197 |
|---|
| End bp | 421531 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641701854 |
|---|
| Product | membrane-associated zinc metalloprotease |
|---|
| Protein accession | YP_001829045 |
|---|
| Protein GI | 182680885 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.728311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGATT TCTTAGCATC TATCTGGTGG ATGATCGTCA GCTTCAGTGT CCTGGTTACG
TTCCACGAAT TCGGGCATTA CTGGGTCGCA CGCCGCTGCG GCGTCAAAGT TCTACGCTTC
TCAATCGGCT TCGGCACGCC GCTTTGGTCA CGCCGCAGTA GCTCAGGTAC CGAATTTGTG
ATCGGCGCAA TCCCACTGGG TGGATACGTG AAGATGCTGG ATGAACGCGA GGCTGATGTA
ACAGTCGCGG AACGCAACCA AGCATTCAAC CGTAAATCGG TATGGCAGCG TATCGCAATC
GTCGCCGCCG GACCGCTCGC CAACCTATTG CTATGCATGC TGCTGCTATG GGTACTGTTC
GTGATCGGAA AGCAAGATTA TTCAGCAACT GTGGGCCGTG CCGAACACCT TGCTGCACAA
GCCGGTATCC ATCCTGGAGA TCGCATCACA GCCATTGATG GTCGTCAGGT CACCAGCTGG
AGCGAAGCCA GCATGCTACT GACGGCCGCA GCCATGGATA GGCAGAATGC CGTTTTAAGC
GTTATCGGAC CTTACGGCGA GCGCAGCGAG CACACCTTAG AATTATCAAA GCTAAAACAA
CCTTTTGATG AAAGGCACGT GACCGCACTG GTTGGCATAA ACTGGCAATT CATGTTGCAG
CCACCCATCA TTGCGAAAAT CGAACCTGGT TCAATCGCCG AAGGCGCCAT AAAACCAGGG
GATATCGTCC TTGCCGTAGA TGGACAACAG ACCCTTTCCA CCGAAGACCT ATACAACCAA
ATTCAGAAAC TGGGCCGCGA TGGACATCCG GGAATGATAG AGATCAGGCG TGGTGAAGAA
CGCTTGGCGC TAGAACTCAG CCCTCGGAAG TCAGCACAGG GAGTCTGGTT ACTCGGTGTA
AAGACTAATC CCGGACCGGT GCCAGCTTTC GACAGTCAAC AACGCTATGG TGTACTTGCA
GCTGTACCGC TGGCAATCCG CGAGACCGCT CGGATGACCG CCGATTCATT GGGAATGATG
AAACGGATCA TCACTGGCCA AGCATCGGCA AAAAATATCT CTGGCCCAAT CAGCATCGCC
AAGATCGCCA ATGCATCAGC CAAACGAGGA GTAGGATGGT TCATCTATTT TCTGTCGTTG
CTATCACTCA GCTTAGCGAT TATCAACCTG TTTCCAATAC CAATATTGGA TGGGGGGCAC
CTACTGTATT ACGCTATCGA ACTACTCAAA GGCAGCCCAC TTAGCACACG TGCCATGGCC
GCAGGCCAAT ACATCGGTTT AGCGCTACTC GCCGGACTGA TGGGGCTAGC GTTCTACAAC
GATCTGCTCG GCTGA
|
|---|
| Protein sequence | MGDFLASIWW MIVSFSVLVT FHEFGHYWVA RRCGVKVLRF SIGFGTPLWS RRSSSGTEFV
IGAIPLGGYV KMLDEREADV TVAERNQAFN RKSVWQRIAI VAAGPLANLL LCMLLLWVLF
VIGKQDYSAT VGRAEHLAAQ AGIHPGDRIT AIDGRQVTSW SEASMLLTAA AMDRQNAVLS
VIGPYGERSE HTLELSKLKQ PFDERHVTAL VGINWQFMLQ PPIIAKIEPG SIAEGAIKPG
DIVLAVDGQQ TLSTEDLYNQ IQKLGRDGHP GMIEIRRGEE RLALELSPRK SAQGVWLLGV
KTNPGPVPAF DSQQRYGVLA AVPLAIRETA RMTADSLGMM KRIITGQASA KNISGPISIA
KIANASAKRG VGWFIYFLSL LSLSLAIINL FPIPILDGGH LLYYAIELLK GSPLSTRAMA
AGQYIGLALL AGLMGLAFYN DLLG
|
|---|
| |