Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0318 |
Symbol | lpxB |
ID | 6204147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 414013 |
End bp | 415170 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641701849 |
Product | lipid-A-disaccharide synthase |
Protein accession | YP_001829040 |
Protein GI | 182680880 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0763] Lipid A disaccharide synthetase |
TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAAG CGCCCCGCAT CGCAATCATC GCGGGTGAAG CATCAGGTGA CCACCTTGGC GCTGGATTAA TCCAACAACT GCGCTTGCAC TTCGCTACCG CAGAATTCAT CGGCATCGGC GGGGACATGA TGCGCTCGGC GGGCTGCCAG ACTTGGTTTG ACACAAGCGA ACTCGCGGTT ATGGGCCTGA CCGAAGTACT ACGGCATCTA CCACGTCTTT TAAAGATACG TCGCGAATTC TGCAAACGCG CACTAGCTTG GCATCCGGAC GTATTGATCG GTATTGACGC ACCAGACTTC AACCTTACAG TAGAACGCTG GTTCAAACAG CGTCACATCC GCACCGTTCA TTACGTCAGT CCCTCGATAT GGGCTTGGCG TGAAAAACGT GCCGCGAAAA TTGGTGCCAG CGTCGACCGC GTCCTCTGTC TCTTCCCAAT GGAACCACCT ATTTACGCAC GCTACGGCAT TGATGCACGC TTTGTCGGCC ATCCAATGGC CGATGAGATT CCCTATCAAA CCGACCGTGC CACAGCGCGA ACTGCATTGG GCCTGCCCCT CCTCAGCCCA GTGCTTGCAG TCCTTCCAGG CAGCCGCCAT AGCGAAATTA GCCAACTTGG CAACACCTTC TTAGAAGCCG CCGGACAATT GTCTGAACAT CTACCAGGGC TACATGTCGT CATCCCAGCT GCAAACACAC AATGCAAACC ACTGCTAGCC GAACAACTCT CGCGCTCCAC CTTACCCGTC ATGCACTCAC ACCTACTGGA TAGTAGCGCT CGTACTGCAA TGTTGGCCGC AGACGTGGTC CTGGTGGCCT CTGGTACAGC GACCCTCGAA GCCATGCTGC TCAAACGCCC AATGGTCGTC GCTTACAAAG TCGCACCACT CACCTATCGC ATTGTCAAAA CACTGAAACT ACTAAAAATC AATCGTTTTG CCCTGCCCAA CATCCTCGCA GGAGAAGACC TTGTACCGGA ACTGATACAG AAGGATTGCA CCGCACCGGC CCTCTGCGCA GCACTGCTAG ACTGCTTCAA ACATCCCCAG AAAGTCACCG CACTACAAAA CCGTTATCTG CAATTACACA CACAACTACG CCGCAACGCA TCGACACGCG CAGCCGAAGC AATCGCCGAA CTATTACAAC AGAGATAG
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Protein sequence | MIQAPRIAII AGEASGDHLG AGLIQQLRLH FATAEFIGIG GDMMRSAGCQ TWFDTSELAV MGLTEVLRHL PRLLKIRREF CKRALAWHPD VLIGIDAPDF NLTVERWFKQ RHIRTVHYVS PSIWAWREKR AAKIGASVDR VLCLFPMEPP IYARYGIDAR FVGHPMADEI PYQTDRATAR TALGLPLLSP VLAVLPGSRH SEISQLGNTF LEAAGQLSEH LPGLHVVIPA ANTQCKPLLA EQLSRSTLPV MHSHLLDSSA RTAMLAADVV LVASGTATLE AMLLKRPMVV AYKVAPLTYR IVKTLKLLKI NRFALPNILA GEDLVPELIQ KDCTAPALCA ALLDCFKHPQ KVTALQNRYL QLHTQLRRNA STRAAEAIAE LLQQR
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