| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0279 |
|---|
| Symbol | |
|---|
| ID | 6203844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 362524 |
|---|
| End bp | 363780 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641701811 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001829002 |
|---|
| Protein GI | 182680842 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAT CCCCTTCCTC CAACGCAACG CTGCGCACGC TGCTATGCCG TCCTGGTTTC
ACGGCGGTGC TGGCCTATCG CATCGCTGCA ACGCTGTCTC ACCAAATCGT GTCCGTGACG
ATCGGCTGGC ATATTTACGA GATCACGCGT AACCCACTTT TACTCGGTCT GGTCGCTCTG
GCTGAGATTC TTCCGTTTTT CTGCATCGCT CCATTCGCTG GTTATTTGGT CGACCATCTA
CCACGGCGTC GGCTGGGAAT GTTCGCAAGT CTCGGCTTGG CAATGACTCC AACAATTTTA
CTGATAGCCG CATTCAACAC GGCACCAGTA ACGGCACCAG TACAGACTAC TTGGCCAATC
TACGTTGCGG CCAGTTTGAG TGGCATGGTG CGTTCTTTCA TCGTCCCGGT GTACAACGCG
CTGTTTGCAC GTGTGCTGCC ACGAGAAGAC TATGCACGTG GTGCTGGACT TGGCACTGTA
GCATTCCAGG CTAGTTTGGT GCTCAGTCCC ATGCTGGGAG GCATCTTGAT CGCTTTGGGC
GGCAAAGAAC TAGCTTATGC TGCCGGAGTG GTCGCAGCCA TCATCGCGCT GCTTGCACTG
GCATTGCTGC GGGTTGAAGA ACCCGCAGTC GATAAACCAC GTGCCCCAGT ATTGGGCAGC
ATCGCCGAGG GCGTGCGCTT TGTGTTCTCC AATCAGATCA TGCTTGGTGC GATGGCACTG
GACATGTTCT CCGTGCTGTT GGGGGGTGCC GTGTCGATGC TGCCGGCGTT CATCCAGGAT
ATTTTTCACT ATGGTCCGGA GGGTCTGGGC ATTTTGCGTG GCACGCCGGC GCTGGGTTCA
GTACTGGCGG GGCTATGGCT GGCAAGGTAT CCGCTACAAC GTCACGCAGG ACGCACCTTA
TTGCTGGCAG TCGCCGGATT CGGGATATGT ACGATCGCGT TCGGTCTGTC CCAACACTTT
TGGGTGTCAG CGGGGATACT TCTGGTTTAT GGGGCATGCG ACGGGATTTC TGTCGTCTCG
CGCGCGTCAA TCCTGCAATT GGTCACACCA GATGAGATGC GCGGTCGGGT CTCGTCAATC
AATAGCATCT TCATTGGTTC GTCTAATGAG CTGGGCGCAT TCTATGACGG AGTCATGGCA
CGTTTTATCG GCCTGGTACA CGCTGTGGTT CTGGGCGGCT TTATGACATT GGTTGTCGTT
GGCATCACGG CACTGAAGGC ACCGCGGTTA CGCCGGTTGG ATCTACGCGA TCTGTAA
|
|---|
| Protein sequence | MSTSPSSNAT LRTLLCRPGF TAVLAYRIAA TLSHQIVSVT IGWHIYEITR NPLLLGLVAL
AEILPFFCIA PFAGYLVDHL PRRRLGMFAS LGLAMTPTIL LIAAFNTAPV TAPVQTTWPI
YVAASLSGMV RSFIVPVYNA LFARVLPRED YARGAGLGTV AFQASLVLSP MLGGILIALG
GKELAYAAGV VAAIIALLAL ALLRVEEPAV DKPRAPVLGS IAEGVRFVFS NQIMLGAMAL
DMFSVLLGGA VSMLPAFIQD IFHYGPEGLG ILRGTPALGS VLAGLWLARY PLQRHAGRTL
LLAVAGFGIC TIAFGLSQHF WVSAGILLVY GACDGISVVS RASILQLVTP DEMRGRVSSI
NSIFIGSSNE LGAFYDGVMA RFIGLVHAVV LGGFMTLVVV GITALKAPRL RRLDLRDL
|
|---|
| |