| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0272 |
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| Symbol | |
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| ID | 6203768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 355852 |
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| End bp | 357516 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641701806 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001828997 |
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| Protein GI | 182680837 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGTC AGCTTGGTTA TTTTCTGTTG AGAGGTGTGT TGTTGTGGCT GTGCTTGGCA
GCACCAGCAG TTGCACAGTC GCTGATGCTG GAACGCTTGG ATGACGACCC GCCAGCACAC
GAGGTGTTGG CGGGTGTATA CGATGCTATG TTGCGCCCAA ATGACACAGG GGGTGCCAGT
ATCTATGAAA CGGCGCGACA TCCGGTGTGG TGGCGTATCC GCGCTGACCG CCAGATCAGT
GCAGCTGGGC AACCAAAGCT GCAGATAGAG TTCCCGTATC TGAACTGGGT TGAGGCTTGG
GTCCCTGGGC GTAGCGTGCC GAGCCACCAT GCGATCTACG GAGCTGCGGC GGACCGCCGC
TATGCAACGC GTGCATTGGT GATCGATTTA CCCGAGGGGT TGCCGCAGGG GAGGGCAGTA
TGGTTGCGTG TGCATGCGCA GAGCACGATA TCAATGCCAG TTTCCATTGT GAGCAATGAT
GTGGTGCATC GTCGTGATCT GGATCATGTT GCTTGGTATA GCTTTATCCT CGGTTTAACG
ACGGTGCTGG CTGTACTTTC AGCCTCACTC TGGGTGCGGT TGCGTGAGCC TGTGTATGGC
TATTTTACGG TCAATTTGGT GTGTGTACTG CTGTACCTGA TCGGCTTTGA TGGCGAGGCG
AGAGGTTTTC CGGTGCTCGG AGAATTGTTT GGCTCCTCAC CAGTACCGAT ACGGGTGGTT
GCCACCTTTG GTGGCTTTGT CATCGTGAAT TTCCAGCGTC ACTACTTGAA CACCGCGTTC
CGGATACCAC GGGTGGATTT GGCGTTGAAA GCTTCTTCGG GTTGGTTACT GGTGATGGCA
GTGTTGAACG TGGTGCCGCA GATCCAGCCA TATCCGGTAC TCACGTATCT TTCTCTGATG
GTTGCTTCGT TGTTGTTGTT GTTTAGTTGT GTATGGTTGG GAGGCGTCCG TGGTCATCGC
GATGCTTGGT CGTTGTTGGT TGCTTGGACC CCTTTGTTAT TGTTCTCTAT GCTGCGCAGC
TTGGAGTTGA TTGGCTGGAA TCGGTTGAGT GGCAATGGCG CTTGGATTGG ATATGGGCTG
AGCATGTCGC TGGGATTATC TTGTTTGCTG GTGACTCTGG TACTGGCTGA TCATATGCTG
GAGTTGCGAC GTGATCGCGA CCGTGCCAGG TTGCTTGCAA ATGTGGATGG TCTGACCGGT
GCGTTGACCC GGGTCGCGAT TGAGCGGAGA TTGGAGCGCG ATATTGATGA TGCCCGTCAG
ATGGGGACTC CTTTATCGGT GGCGTTTATC GACATTGATC ATTTCAAACG TATCAATGAC
GAATATGGGC ATGCTGCTGG AGATGCTTGT TTGCGTCAGG TGGTGCAGCG GGTGCGCGGT
TGGCTACGTG CCAGTGACGC GCTTGGGCGT CATGGAGGTG ATGAGTTAAT TGCGATCCTT
CCTGGGGCCG ACTTGGTAGC AGCGCGGCGT GTCGCCGAGG GGATCCGCGT TGCTGTTTCA
AGCCAGCCGT TCCAATTTGA ATGTACCCGG TTACGTTGCA CATTGAGTCT TGGGGTGGCC
TCGTGGTTGC CTGATGAATC CATCGAAGCA CTATTGCAAC GTGCCGATAA CGGGTTGTAT
GCAAGCAAGG CGGCTGGACG TGATCGGGTC AGTACTGAGA TGTAA
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| Protein sequence | MKRQLGYFLL RGVLLWLCLA APAVAQSLML ERLDDDPPAH EVLAGVYDAM LRPNDTGGAS
IYETARHPVW WRIRADRQIS AAGQPKLQIE FPYLNWVEAW VPGRSVPSHH AIYGAAADRR
YATRALVIDL PEGLPQGRAV WLRVHAQSTI SMPVSIVSND VVHRRDLDHV AWYSFILGLT
TVLAVLSASL WVRLREPVYG YFTVNLVCVL LYLIGFDGEA RGFPVLGELF GSSPVPIRVV
ATFGGFVIVN FQRHYLNTAF RIPRVDLALK ASSGWLLVMA VLNVVPQIQP YPVLTYLSLM
VASLLLLFSC VWLGGVRGHR DAWSLLVAWT PLLLFSMLRS LELIGWNRLS GNGAWIGYGL
SMSLGLSCLL VTLVLADHML ELRRDRDRAR LLANVDGLTG ALTRVAIERR LERDIDDARQ
MGTPLSVAFI DIDHFKRIND EYGHAAGDAC LRQVVQRVRG WLRASDALGR HGGDELIAIL
PGADLVAARR VAEGIRVAVS SQPFQFECTR LRCTLSLGVA SWLPDESIEA LLQRADNGLY
ASKAAGRDRV STEM
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