| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0242 |
|---|
| Symbol | |
|---|
| ID | 6203816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 318601 |
|---|
| End bp | 319287 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641701776 |
|---|
| Product | NADH dehydrogenase subunit C |
|---|
| Protein accession | YP_001828967 |
|---|
| Protein GI | 182680807 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCAGC CGCGTGGTGA GATCAGTCTT GATGTGCCCG TGGTTGAGTG GTGTGCCGTT
TGCAAAGCGT TGCGTGACGA GTTCGACTTT GAACAGTTAT CCGATCTTTG CGGAGTGGAC
TATCTTGGCT ATGGCAATGC GGAGTGGGAC ACCACTGATG TATCCGCGCA GGGGTTCAGC
CGTGGCGTTG CTGGTAAGGC GGTTGGCCGC TTTGCTTGGG GTGAGTTTCC AAGTGCAGGC
AGCAATGATG GTACTCAGCC GTGGGATGTT CCGCAGGAGC GCTTTGCAGT GCTCGCGCAC
CTCATTTCTT ATCGGCATAA CCGGCGTTTG CGGGTGCGTT GTTTTGCTTC CAATGATGCG
TTACCGATCG TCGCTTCGCT GACGGACGTA TGGCCTGGGG TGAATTGGTT CGAGCGTGAG
GCATTTGATT TGTTCGGTAT TGTGTTCGAG GGGCACCCTG ATTTGCGTCG CATCCTGACG
GACTATGGAT TCATTGGTCA TCCCTTTCGT AAGGATTTTC CGCTGACCGG CAACGTTGAG
GTGCGTTACG ACGAGGAAAA GAAGCGTGTT GTGTATGTCC CGGTCACCTC GGTTGAGCCG
CGTGTCAGTG TTCCGCGGGT GATTCGTGAT GATCCCCGCT TTGGGGCTGC AGCGGGCGAA
TCTACTCATT CGGAGACTGT TAAGTGA
|
|---|
| Protein sequence | MAQPRGEISL DVPVVEWCAV CKALRDEFDF EQLSDLCGVD YLGYGNAEWD TTDVSAQGFS
RGVAGKAVGR FAWGEFPSAG SNDGTQPWDV PQERFAVLAH LISYRHNRRL RVRCFASNDA
LPIVASLTDV WPGVNWFERE AFDLFGIVFE GHPDLRRILT DYGFIGHPFR KDFPLTGNVE
VRYDEEKKRV VYVPVTSVEP RVSVPRVIRD DPRFGAAAGE STHSETVK
|
|---|
| |