| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0216 |
|---|
| Symbol | |
|---|
| ID | 6202226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 291110 |
|---|
| End bp | 292219 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641701754 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001828947 |
|---|
| Protein GI | 182680787 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC AGCCGACACA CAACAACTGC ACCAACGATG CAATCAAGCG TCGACGCTCG
CCACTGACGG CACGCCCCCA AGCTCCACTG TCACTCGTTG TATTAGCAAC ATTGGCAGTA
GGTTACACAC TGTGGGCTAC ACAGGCAGTG ATCCTTCCCG TATTACTGGC TGTATTCTTC
GCCCTAGTAG GCAACCCCAT CCTACGCGCA CTGGGTCATA TACGGATTCC ACGCGCCATT
GGGGCGTTGC TGTTGTTGTG CTTGGGAATC AGCGGGACAG TGGTGCTAAG TGTAGAACTC
GCGGGACCAG CCAGCGAATG GATACAACAA GCACCGGACA AAATACGCCA AGTAGCACGC
CAAGTACGCC ACCTTACCAG ACCGATGCAA CAAGCCAATC AAGCAGTAGA AAGCTTGGCA
CGCGCAGCCG ATGGTGAAAC CGAACGCCAG TCCCAGATTG TGCGCACCCG CCTATACAAC
CCTTACACCG TACTGATGGA CACACACAAA CTGGTCATCT CGGTCTTGGG AGTGATCCTA
TTGACGTTCT TCTTCATGGT TTTTGGGGAG AAGCTGCAAC GCAAAGCGAT TGCACTGCTC
CCAAACCATC ATCAACAACG TTTCACCGCC TCAATCCTAC GCAACCTGGA ACACGAGATC
TCACGCTATG TACTGACTAT CAGCGTGATA AACGCCCTCG TCGGCTTGAT ATTCAGCGGT
TTACTGTTGC TACTAAGCAT TCCGCTGCAA GAAGCACTGC TATGGGGCAC AGTGGTTGCC
CTACTTAACT TTGCACCATA TGTAGGGCCG CTCATTGGTG TATTGCTGAT GCTACTCATC
GGCTTAGTAC AATTTCATGA ATCCAGTAGA GCATTACTAC CGGCACTGCT GTATCTGATG
CTACACACGC TGGAAGGGCA ACTCATCACA CCAATCATCC TCGGGCACCG CATGGCGATC
TCGCCACTCA TGTTGATCGT GGCATTGCTA CTGTTCGGCT CCCTGTGGGG ACTCATTGGC
CTCTTGCTGG CAGTACCGAT GCTTGTATGC ATCAAGATGG TGATGAGCCG AATTGAGGAC
TTGCAGCGCT GGTCACGACT GTTGGAATAA
|
|---|
| Protein sequence | MTDQPTHNNC TNDAIKRRRS PLTARPQAPL SLVVLATLAV GYTLWATQAV ILPVLLAVFF
ALVGNPILRA LGHIRIPRAI GALLLLCLGI SGTVVLSVEL AGPASEWIQQ APDKIRQVAR
QVRHLTRPMQ QANQAVESLA RAADGETERQ SQIVRTRLYN PYTVLMDTHK LVISVLGVIL
LTFFFMVFGE KLQRKAIALL PNHHQQRFTA SILRNLEHEI SRYVLTISVI NALVGLIFSG
LLLLLSIPLQ EALLWGTVVA LLNFAPYVGP LIGVLLMLLI GLVQFHESSR ALLPALLYLM
LHTLEGQLIT PIILGHRMAI SPLMLIVALL LFGSLWGLIG LLLAVPMLVC IKMVMSRIED
LQRWSRLLE
|
|---|
| |