Gene XfasM23_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0211 
Symbol 
ID6202448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp284825 
End bp286240 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content57% 
IMG OID641701749 
ProductUDP-N-acetylmuramate 
Protein accessionYP_001828942 
Protein GI182680782 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TGCATATTCT TGGTATTGCC GGAACATTTA TGGGGGGCAT CGCTGCGCTG 
GCACGTGAAT TGGGCTGGAA TGTTGCGGGG AGCGATCAGG CCATCTATCC GCCAATGTCA
GTGCAATTGG AACGGCTTGG CATCACATTG ATGCATGGCT ATTTGCCGGA GCATATCGCT
GCGGATTGTG CTGAGGTGGT GGTAGGGAAT GCGCTGTCGC GTGGTAATGC AGCGGTTGAG
GCGTTGCTTG ATAGCGGATG CCGTTACATA TCGGGGCCCC AATGGTTAGC TGAGCGGGTA
TTGCCAGGGC GCGACACGCT TGCGGTGGCA GGAACGCATG GTAAGACGAC GACAACGACG
ATCTTGGCTT GGTTATTGGA GGCAGCCGGA CGTGCGCCGG GATTCCTGAT TGGTGGTGTG
CCTGAGAATT TTGGTGTGTC AGCGCGGCTT GGCGGTGTGC TGAGCCAGGG GAGTATGGAT
CCGTTGGTGG CGGGTGAGGT GTCTGCAGCT GTTCGACCGT TGTTTGTCGT GGAGGCGGAT
GAGTACGACA CTGCATTCTT TGATAAGCGC AGCAAATTCG TACATTACCG TCCACGTGTG
GTGATTCTGA ATAATCTAGA GTACGACCAT GCCGATATCT TCCCTGATGT GGCTGCGATA
CAACGGCAAT TCCACCATTT AGTGCGTACC ATCCCTGGTC GTGGTCGGCT GATCGTGAAT
GGTGAGGATC AACGTTTGGC CGAGGTCTTG GCGATGGGGT GTTGGACGCC GGTGGAGCGC
TTCGGTTTCG ATCCTGAGTT CCACTGGAGT GCGCGTTTGA TTGCTGCCGA TGGGAGTCGT
TTTTCGGTCT GGCACGAGGG ATGTGAGGTC GGTCAGGTCA GTTGGTCGTT GCTTGGTCGT
CACAATGTAC TCAACGCGCT GGCGGCGCTG GCGGCTGCAC ATGCGGTGGG TGTTGCGCCG
GCTGCGGTGA TTCCGTCGCT CGCGCAGTTC CGCAGTGTCA AACGTCGCTT GGAATGCTTG
GGTGAGAGAG GGGCGGTGAC GGTTTACGAC GACTTTGCAC ACCACCCCAC TGCGATCGCT
ACCACGCTGG AGGGGTTACG GGCGAATGTG GGTGATGCGC GTATTGTGGT CGCGATCGAG
ATGCGCAGTC ATTCGATGCG GCTGGGGGCG CATGCGCAGG CCTTGGCGCC GTCGCTACAG
GCGGCTGATA CCGTGGTGTT TCTGGATCAT CCAGGATTGG TGTGGAACGC AGCAGGCGTG
GTTGCACAGA TGCATGGTCA GGTGCATGTG GTTCATGATA CTGAGGGGTT ACTGTCGATG
CTCAATGAGG TGGTACATGC CAGTGACCAT GTTGTATTCA TGTCTAATGG TGGATTTGAT
GGTGCACCAC GTCGATTCTT AGCGCAGTTG CGCTAA
 
Protein sequence
MNKLHILGIA GTFMGGIAAL ARELGWNVAG SDQAIYPPMS VQLERLGITL MHGYLPEHIA 
ADCAEVVVGN ALSRGNAAVE ALLDSGCRYI SGPQWLAERV LPGRDTLAVA GTHGKTTTTT
ILAWLLEAAG RAPGFLIGGV PENFGVSARL GGVLSQGSMD PLVAGEVSAA VRPLFVVEAD
EYDTAFFDKR SKFVHYRPRV VILNNLEYDH ADIFPDVAAI QRQFHHLVRT IPGRGRLIVN
GEDQRLAEVL AMGCWTPVER FGFDPEFHWS ARLIAADGSR FSVWHEGCEV GQVSWSLLGR
HNVLNALAAL AAAHAVGVAP AAVIPSLAQF RSVKRRLECL GERGAVTVYD DFAHHPTAIA
TTLEGLRANV GDARIVVAIE MRSHSMRLGA HAQALAPSLQ AADTVVFLDH PGLVWNAAGV
VAQMHGQVHV VHDTEGLLSM LNEVVHASDH VVFMSNGGFD GAPRRFLAQL R