| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0195 |
|---|
| Symbol | |
|---|
| ID | 6202035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 265284 |
|---|
| End bp | 266345 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641701733 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_001828926 |
|---|
| Protein GI | 182680766 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTGG CAACGTGGCT CGTGACCGGT GGTGCCGGTT TCATCGGCGG TAATTTTGTA
TTGCAAGCGA TTAGCCTCGG GCATCGTGTG ATTAATCTTG ATGCTCTGAC GTATGCGGGT
CATTTGGAGA CGCTCGCTGC GCTTGATGGG TGCGCGGAGC ATCTTTTTGT TCATGGTGAT
ATTGGCGACC GTGCGTTGGT GAGCCGTTTG CTGGATACGC ATCGCCCGGA TGCAGTGCTG
AATTTTGCTG CTGAGAGTCA CGTTGATCGT TCGATTGATG CTCCCGCTGC GTTCATTCAG
ACCAATGTGG TTGGCACGTT GCTGTTGTTG GAGGCGGTGT GTGGGTACTG GAAGGCGTTG
CCGGAGGCGG CGCGTGCTGC GTTCCGTTTT CTGCATGTAT CCACAGATGA GGTTTACGGC
AGTTTGGGGG AGACGGGCGC ATTTACAGAG AGGACGGCGT ATGCACCTAA TTCGCCTTAT
TCGGCGTCAA AGGCCGCGTC TGATCATTTG GTCCGTGCGT TTCACCATAC GTACGGATTG
CCGGTGCTGA CCACGCATTG TTCAAATAAC TATGGGCCAT ATCATTTTCC GGAGAAGCTG
ATTCCGCTGG TCATCACCAA GGCGTTGGCG GGTGAGCCGT TACCTGTGTA TGGCGATGGG
CGGCACGTGC GTGATTGGCT GTTTGTCGGC GATCACTGTA CCGCGCTGTG TGCTGTATTG
GCTGGAGGGC GGGTGGGTGA AACGTACAAT ATCGGGGGGC AGGCCGAGCG TGAGAATCTT
GAAGTGGTCC GCATGATTTG CCGTTTGCTT GACGAGCGCC GCCCGCGTGC CGATGGGCTG
AGTTATCAAA GCCAGATTGT TCATGTTGCA GATCGTCCGG GGCATGATCG CCGTTATGCG
ATCGACACGT CCAAGTTGGT GAGTGAGTTA GGCTGGGCGC CGGTGTATCG CTTTGAGCAG
GGACTTGCGC TGACTGTGGA TTGGTATTTG CAGCATCAGG ATTGGGTACG TGCGGTGCTC
CAAGGGCGTG ACCGCGTTGA GGGCCTACTG ACTGCGGTGT AA
|
|---|
| Protein sequence | MGLATWLVTG GAGFIGGNFV LQAISLGHRV INLDALTYAG HLETLAALDG CAEHLFVHGD
IGDRALVSRL LDTHRPDAVL NFAAESHVDR SIDAPAAFIQ TNVVGTLLLL EAVCGYWKAL
PEAARAAFRF LHVSTDEVYG SLGETGAFTE RTAYAPNSPY SASKAASDHL VRAFHHTYGL
PVLTTHCSNN YGPYHFPEKL IPLVITKALA GEPLPVYGDG RHVRDWLFVG DHCTALCAVL
AGGRVGETYN IGGQAERENL EVVRMICRLL DERRPRADGL SYQSQIVHVA DRPGHDRRYA
IDTSKLVSEL GWAPVYRFEQ GLALTVDWYL QHQDWVRAVL QGRDRVEGLL TAV
|
|---|
| |