| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0188 |
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| Symbol | |
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| ID | 6204083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 257043 |
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| End bp | 258152 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641701726 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001828919 |
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| Protein GI | 182680759 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAACA ATATCCTGAC TCTGTCGATG TGCATCACAC TTGGTGTCAT CACTTTAAGC
AGTTGCGGCA GCGACACATC ACCGCAAACA ACGCCGCTGC GCACGGTAAA ACTCGAGACG
GCTGGAGCTG AAAATCTCGC CAAGACCCAG TTTGTAGCCA GCGTGCGTCA GGAACAACGC
GCAGATCTAG CCTTCGAAAA CGGCGGGCGG ATTGCCGCAA TCAACGTCGA TGTTGGCGAC
AAAGTGCGCC ATGAACAAGT GCTGGCCCGC CTGGACAGGG AGCCAGTGCG GCTAAAACTG
CAACAAGCAG AAGCCACTTT ACGTGCTGCC ACCGCACAGT TGCACGAACG CCAGACTCAG
CTGAATCAGC AGCAAGCGAT GTTTAAAGAA GCGATGGTTT CTCAGGCTGC GCTCACCAGC
GCACAAGTCG CATTAGACGC TGCGCAAGCC GATCTGCACG TAGCCGAGTC CAATCACGCA
TTAGCTAAAC GCGCACTGCG CCAAAGCGAA CTGCGTGCAC CATTCGATGG AAGTGTCGTC
GCACGTCTCT TGCAACCACA GGCTGATACT GCACCAGGTC AAACGGTGTT GCAGATCGAA
GGACGGGGGC GTCTACAAGC AGTAGCCACC CTGCCAGCCG AGATTGCCCA GGCACTGAGT
CCAGACAAGG TGATCCAGGG AAATCGCACC GATACACCGC AAGCAAGCAT CTCACTGCGC
CTGCGCAGTG TGTCTCCACG CTTGGAAAGC GGTGCCAGCC TGCAAGCAAT CTTCGATGTG
ACAGAGACAA CGACTCCGCT GCACAGTGGC GACACGCTGT TATTGGCACT GTCTGCCACC
GCAACGCCGG CACTGTCGGT GCAGCTGCCC GCAGTGATAC CGGGCTTGAA CGGCAACAGT
GGAATCGTGT TTGTCTATCA ACCTAAAACC GGGGTGGTGT TACGCCGCGA TGTCACACTC
GGAATGATCG AAGGTGAGCG GATGCAGATC CGCTCCGGAC TCAAGCCCGG AGAACAGGTT
GTGGTTGCCG GGGCAGCGTT CCTCAGCGAC GGTCAAAAAG TGCTGCCGTT CCGTTCCAGC
TCGCGTTTGA GTACTGGAGA CAGCCGATGA
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| Protein sequence | MKNNILTLSM CITLGVITLS SCGSDTSPQT TPLRTVKLET AGAENLAKTQ FVASVRQEQR
ADLAFENGGR IAAINVDVGD KVRHEQVLAR LDREPVRLKL QQAEATLRAA TAQLHERQTQ
LNQQQAMFKE AMVSQAALTS AQVALDAAQA DLHVAESNHA LAKRALRQSE LRAPFDGSVV
ARLLQPQADT APGQTVLQIE GRGRLQAVAT LPAEIAQALS PDKVIQGNRT DTPQASISLR
LRSVSPRLES GASLQAIFDV TETTTPLHSG DTLLLALSAT ATPALSVQLP AVIPGLNGNS
GIVFVYQPKT GVVLRRDVTL GMIEGERMQI RSGLKPGEQV VVAGAAFLSD GQKVLPFRSS
SRLSTGDSR
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