Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0178 |
Symbol | nusA |
ID | 6204055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 242666 |
End bp | 244177 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641701716 |
Product | transcription elongation factor NusA |
Protein accession | YP_001828909 |
Protein GI | 182680749 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.125443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGG AACTTTTATT GGTAGTTGAT GTGGTCGCTA ACGAAAAGGG TGTTCCACGC CAGATCATCT TTGATGCCAT TGAGGTTGCG TTGGCGTCGG CGGCGAAGAA GCGCTATCAA GATCGTGACA TTCTAACGCG TGTCACGATC GATCAAAAGA ACGGCAACTA TGAGACTTAC CGCCGTTGGG AGGTTGTCGC TGATGATGTG GTGATGGAAT CGCCTGAACG CCAGATTCGT CTCATGGATG CGCTTGATGA AGCTGATGGT GTAGAGGTTG GTGATTACAT TGAAGAGCAG ATTGAGAATC CGGATTTTGG CCGTATCTCT GCACAGGCCG CTAAACAAGT GATTGTGCAA CGTGTGCGTG AGGCTGAACG TCAGCAGGTT GTTGATGCGT GGAAAAATCG TGTTGGCGAG TTAGTAACTG GCGTAGTCAA GCGTGTTGAA CGCGGTAATA TCTATGTCGA TTTAGGTGGA GGTACGGAGG CTTTTATCCC TAAGGACAAG GGTATCCCGC GAGATGTAAT ACGTCCTGGA GATCGTGTGC GTGGTTACTT GGCTGAGGTG CGTTCTGAGT CACGTGGCCC GCAGCTCTTC ATTAGTCGCT CTGCTCCAGA GTTTATGATC GAATTGTTTA AATTGGAAGT CCCTGAGGTT GGTCAGGGTT TGGTCGAGAT CAAAGGGTGT GCTCGTGATC CTGGCGACAG GGCAAAAATT GCCGTGATTG CGCATGATAA TCGCACTGAT CCGATCGGTG CTTGCATAGG TATGCGTGGA TCGCGTGTGC AGGCTGTCTC CAACGAACTT AACGGCGAGC GTGTAGATAT TGTATTGTGG AACGAAAATC CGGCTAACTT TGTTATCAAT GCGATGGCTC CCGCTGAGGT GCAGTCGATC ATTGTTGATG AGGAGAGGCA CTCGATGGAT TTAGCTGTTG CTGAGGATCG TTTGGCCCAG GCGATTGGTA AAGGCGGCCA GAATGTACGT TTGGCGAGTC GCTTGACGGG TTGGCAATTG AATGTGATGA CCGCCGAACA GGTTGCTGCC AAGTCGGAAG CCGAGCAGCT TGCCGCCCGT CGACTGTTTA TGGACCGCTT GGAAGTGGAT GAGGAGATTG CATCCATTCT GGTTATGGAA GGATTTAACA CTATAGAGGA AATCGCTTAT GTTCCTGTCG GTGAGCTCCT GGCAGTGGAA GGTTTCGATG AGGATATTGT TGAGGAGCTC CGTGCTCGGG CACGTGATGC GTTACTGAAT GCAGCCTTGG CCGAAGAGGA GGTTTTGGAA CATTCTGGTC CAGCGCCGGA TTTATTGGAG CTCAATGGTA TGGACGAGAT CACTGCGCAC GCGCTTGCTG CTCATGGAGT GCGTACTAGC GAGGACCTTT CAGATTTGGC TGCTGACGAG ATCGTCGAGT TTGATATTCA AGGCATGACC GTACAGCGTG CAGCTGTATT GATACTTGCT GCTCGTGCCG AGGAAATTGC TCGTTTGGAA CGTGGCGAAT GA
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Protein sequence | MSKELLLVVD VVANEKGVPR QIIFDAIEVA LASAAKKRYQ DRDILTRVTI DQKNGNYETY RRWEVVADDV VMESPERQIR LMDALDEADG VEVGDYIEEQ IENPDFGRIS AQAAKQVIVQ RVREAERQQV VDAWKNRVGE LVTGVVKRVE RGNIYVDLGG GTEAFIPKDK GIPRDVIRPG DRVRGYLAEV RSESRGPQLF ISRSAPEFMI ELFKLEVPEV GQGLVEIKGC ARDPGDRAKI AVIAHDNRTD PIGACIGMRG SRVQAVSNEL NGERVDIVLW NENPANFVIN AMAPAEVQSI IVDEERHSMD LAVAEDRLAQ AIGKGGQNVR LASRLTGWQL NVMTAEQVAA KSEAEQLAAR RLFMDRLEVD EEIASILVME GFNTIEEIAY VPVGELLAVE GFDEDIVEEL RARARDALLN AALAEEEVLE HSGPAPDLLE LNGMDEITAH ALAAHGVRTS EDLSDLAADE IVEFDIQGMT VQRAAVLILA ARAEEIARLE RGE
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