| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0173 |
|---|
| Symbol | panB |
|---|
| ID | 6202939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 236668 |
|---|
| End bp | 237486 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641701710 |
|---|
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| Protein accession | YP_001828904 |
|---|
| Protein GI | 182680744 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
|---|
| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATAT ATACCAATAG CAAACCTTGG ACGGTGCCTG CTTTGGCGGA GGCCAAGCGA
AACGGTTCTA AAATCGTGAT GTTGACTGCT TATGATGCTG GGTTTGCTCG TATTCTTGAC
GCAAACGGCG TAGACCTAAT CCTTGTTGGC GATTCGTTGG GAATGGTGGT ACAGGGCCAT
GACTCGACTC TTCCGGTGAG TGTGCATGAC ATGGTGTACC ACACTGCGTG TGTGGCTCGG
GGGGTACGTC ATGCAATGCT TGTGGTTGAT TTGCCATTTC AGGCTGATGC GTCGCCGGAA
CGTGCGCTAG AGGCTGCCAC TGCATTGCTG CGAGTGGGGG CACAGATGAT CAAAATCGAA
GGTGCTGGGC ACAAGCTTGA GGTGATTAGT TACTTGGTTG AGCGTGAGAT TCCGGTGTGT
TCACACTTGG GGCTGACTCC GCAATCGGTA CTGCGTTTTG GAGGTTATAA GGTGCAAGGA
CGTGGTGAGG AGGCTGGGGG GCGTTTGCGT GCCGAGGCAC GTGCGGCGGT GGAGGCTGGG
GCTACTCTCT TGCTATTGGA GTGTGTGCCG TCGCAGTTGG CAGCGCAGAT CACTACCGAT
GCATCGGTGC CGACGATTGG TATCGGTGCC GGTGCTGGTT GTGATGGCCA AGTGCTGGTG
CTGCATGATC TCCTTGGTCT AGATAGCGGT CACCCTCGAC CGAAATTCGT TAAAGATTTT
CTCGCTCATG GGGGATCGGT TGCTGGCGCG GTTCGCGCTT ATGCGAATGC GGTTCGAGAT
GGTTCGTTTC CAGATGTCGA GCATACTTAC ACATCGTGA
|
|---|
| Protein sequence | MSIYTNSKPW TVPALAEAKR NGSKIVMLTA YDAGFARILD ANGVDLILVG DSLGMVVQGH
DSTLPVSVHD MVYHTACVAR GVRHAMLVVD LPFQADASPE RALEAATALL RVGAQMIKIE
GAGHKLEVIS YLVEREIPVC SHLGLTPQSV LRFGGYKVQG RGEEAGGRLR AEARAAVEAG
ATLLLLECVP SQLAAQITTD ASVPTIGIGA GAGCDGQVLV LHDLLGLDSG HPRPKFVKDF
LAHGGSVAGA VRAYANAVRD GSFPDVEHTY TS
|
|---|
| |