| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0160 |
|---|
| Symbol | trpC |
|---|
| ID | 6203521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 219611 |
|---|
| End bp | 220405 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641701695 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_001828891 |
|---|
| Protein GI | 182680731 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.286588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA TACTCACTAA GATTCTTGCG CGGAAGGTGG AGGAGATTGC CGAGCGCCTT
TTGCATGTCT CACAGGCTGA GTTGGTTGCG CGTTGTGCCG ATTTGCCGAC ACCCCGTGGT
TTTGCTGCTG CGTTGCAGGC GACGATTGCG CATGGTGACC CAGCAGTGAT TGCTGAGATT
AAGAAGGCCA GTCCTTCAAA AGGGGTGCTT CGCGAGGATT TTCGTCCTGC AGAGATCGCT
ATCTCATATG AGCTTGGTGG TGCTAGCTGT CTATCAGTGC TGACGGACGT GCATTTCTTC
AAGGGTCACG ATGATTATTT GAGTCAGGCG CGTGATGCTT GCACTCTTCC GGTGTTGCGC
AAAGATTTCA CGATAGACCC GTATCAGGTG TATGAGGCAC GTGTGCTTGG TGCTGATTGT
ATTTTGCTGA TTGTCGCTGC ATTGGACGAT GCTCAATTGG TTGATTTGTC CGGCTTGGCA
TTGCAATTGG GGATGGATGT GCTGGTTGAG GTTCACGATA TTGACGAACT TGAGCGTGCA
ATACAGATTT CTGCGCCATT GATTGGTATC AACAACCGTA ATCTGAGTAC CTTCAACGTG
TCATTGGAGA CAACGTTGAC AATGAAAGGG TTAGTGCCGC GTGATCGTTT GCTCGTAAGT
GAGAGCGGTA TCCTTACCTC TGCCGATGTG CAACGGTTGC GTGCTGCGGG TGTGAATGCG
TTTCTTGTTG GTGAGGCGTT TATGCGTGCG GCTGAACCTG GTGAGTCACT CAGAGAGATG
TTCTTCATCA CGTGA
|
|---|
| Protein sequence | MSNILTKILA RKVEEIAERL LHVSQAELVA RCADLPTPRG FAAALQATIA HGDPAVIAEI
KKASPSKGVL REDFRPAEIA ISYELGGASC LSVLTDVHFF KGHDDYLSQA RDACTLPVLR
KDFTIDPYQV YEARVLGADC ILLIVAALDD AQLVDLSGLA LQLGMDVLVE VHDIDELERA
IQISAPLIGI NNRNLSTFNV SLETTLTMKG LVPRDRLLVS ESGILTSADV QRLRAAGVNA
FLVGEAFMRA AEPGESLREM FFIT
|
|---|
| |