Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0143 |
Symbol | |
ID | 6203472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 198131 |
End bp | 198859 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641701678 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001828874 |
Protein GI | 182680714 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTCGTT GTCATGTCAA TGTGCCCCTG ATTCTTGGCA ACGAAATAAT CCTCCCAGAA TTGGTTGCTA ACCACCTTTT GCGTGTGCTG CGTTTATGCG AGGGCGATAC CTGTGTACTG TTCAACGGTG ACGGCCATGA TTATTTAGCA CGTCTTATTG CCACAGGCAG GCGCGAGGCG TGGGCACGCA TTGAAGGCGT TTCCGAGGTG TGTAATGAAT CACCACTGGC GATTACCCTG GTCCAAGCAA TCACACGCGG TGAGAAAATG GATTTGATTG TGCAAAAGGC AACGGAATTA GGCGTTGTCG CAATCGTGCC AGTTGATACT GAACGCAGCG GGGTGCGCTT GGATAGCGAA CGCGTAGCCA AACGGCTGGC ACACTGGAAC AACGTGGTCA TTTCAGCGTG TGAGCAGTGT GGCCGCACGC GCGTGCCAGA AGTACAGATG CCGCGTGCAT TGCAAGTGTT GCCGGAAATA CTTGATCCGG ACACGTTGCG CCTGATTCTC GACCCGAAAA GTGAACATCG ATTGTCAACG CTATCAAGGC TGACACCAGT TGAGGTCATC ATTGCGATTG GCCCCGAGGG TGGTTGGTCG CCTCGTGATC TTGAAATACT CAAAGATGCA GGTTTTATCG GTTTTAGCTT GGGGCCGCGT ATTTTGCGCA CTGAAACAGC AGGATTAACC GCCATCGCCG TGTTGCAAGC ACAGCTTGGT GACCTGTAG
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Protein sequence | MSRCHVNVPL ILGNEIILPE LVANHLLRVL RLCEGDTCVL FNGDGHDYLA RLIATGRREA WARIEGVSEV CNESPLAITL VQAITRGEKM DLIVQKATEL GVVAIVPVDT ERSGVRLDSE RVAKRLAHWN NVVISACEQC GRTRVPEVQM PRALQVLPEI LDPDTLRLIL DPKSEHRLST LSRLTPVEVI IAIGPEGGWS PRDLEILKDA GFIGFSLGPR ILRTETAGLT AIAVLQAQLG DL
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