| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0131 |
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| Symbol | |
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| ID | 6202980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 183818 |
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| End bp | 184462 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641701666 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001828862 |
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| Protein GI | 182680702 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.192747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCGA ATGCTCATTC CTCTATTGAT TCACGCGACG AGTTAGCCAG CGCCATCATC
CATGGTTTGG GTGCATTGGC TACGTTGGCT GCTGGATCGG TACTCATTAC CCTCGTTTCT
ATCTACGGTG ATAGGTGGCA GTTACTTACC TCAATTGTGT TCAGTACCAC TTTATTCTTG
TTGTATGTGG CATCTACCCT GTATCACGCA ATTCCACATC CTGGCGCTAA AGCCAGGTTG
CGAGTTTTCG ACCACTGCGC AATCTACTTG TTGATTGCTG GTACCTACAC CCCGTTCACT
TTGATTACTT TGCGTGGTCC GTGGGGTTGG GGCTTGTTCG CTACAATTTG GACACTGGCA
TTGAGTGGAG TGGTCTTCAA GCTCTTCTTT ACGGAACGTT TCCGCCTACT TTCGACCATT
GTTTATGTGG TCATGGGTTG GTTGGTGGTT ATTGCCCTCG GACCATTGCA GCGCTTGCTT
GATGGTTGGA CGCTGCGTTG GTTGCTTGCC GGCGGGGTGC TATACACACT TGGCACCTAC
TTTTATCATC GCGATGAGGT GCGTTACTTT CATGCGATCT GGCATGTATT TGTGCTTGCT
GGGAGCGTCT GCCACTTCAT TGCAGTCACT GCTCAGGTCC TATGA
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| Protein sequence | MNANAHSSID SRDELASAII HGLGALATLA AGSVLITLVS IYGDRWQLLT SIVFSTTLFL
LYVASTLYHA IPHPGAKARL RVFDHCAIYL LIAGTYTPFT LITLRGPWGW GLFATIWTLA
LSGVVFKLFF TERFRLLSTI VYVVMGWLVV IALGPLQRLL DGWTLRWLLA GGVLYTLGTY
FYHRDEVRYF HAIWHVFVLA GSVCHFIAVT AQVL
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