| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0115 |
|---|
| Symbol | pyrE |
|---|
| ID | 6203496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 155176 |
|---|
| End bp | 155835 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641701645 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_001828846 |
|---|
| Protein GI | 182680686 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCACT ACCGCCAACG TTTCCTACAG CTGGCTTTAG ACTCAAACGC GCTGTGCTTC
GGCGAATTCA CGCTCAAATC CGGCCGCATC AGTCCCTATT TCTTCAACGC TGGACACTTT
AATTCAGGCG CAAAAACTGC TGCCTTAGCA CAGTGTTACG CCGACGCAAT TGATGCGGCG
AATATGAACT TTGACCTGGT GTTTGGTCCA GCCTACAAAG GGATTCCACT CGCTACAGCA
CTGGCCTGCG AGTACGCACG GCGTGAGCGT GACCTACTCC TCACATTCAA TCGTAAAGAA
GTCAAAAATC ACGGGGAGGG TGGCACTCTC ATCGGCGCGC CACTGAACGG ACGCAAGATA
TTGATTATCG ACGACGTCAT CACCGCAGGC ACAGCAATCC GAGAGGCATT ACGTATCATC
CGCAACGCTG GAGGTACCCC AACGGGGATT GCCGTAGCCC TGAATCGCCA GGAAATCGCT
TCAGAGACCA ACCGCCAATC GTCCGTTCAA GCACTGATGG CCGAAACCGG GATCCCTGTC
GTAGCGATCG CAACCCTGAG CGACCTGTTA GCATTTGTAG AAGAGAACGC CAGTTTGGCC
AAGTTTTACG AGCCTCTGCT GGCCTACAAG ACCCACTATG GGACCGAAGC ATCTGACTGA
|
|---|
| Protein sequence | MSHYRQRFLQ LALDSNALCF GEFTLKSGRI SPYFFNAGHF NSGAKTAALA QCYADAIDAA
NMNFDLVFGP AYKGIPLATA LACEYARRER DLLLTFNRKE VKNHGEGGTL IGAPLNGRKI
LIIDDVITAG TAIREALRII RNAGGTPTGI AVALNRQEIA SETNRQSSVQ ALMAETGIPV
VAIATLSDLL AFVEENASLA KFYEPLLAYK THYGTEASD
|
|---|
| |