Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0107 |
Symbol | |
ID | 6203347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 145902 |
End bp | 146717 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641701637 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001828838 |
Protein GI | 182680678 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA CCATATTGAT CACAGGAGCC ACATCCGGCT TCGGCAGAGC CGCCGTGCAT CGCTTCGCCA ACGCCGGCTG GCGTGTCATC GCCACAGGAC GCCGCATTGA GCGCCTGGAA GCACTCGCCG CCGAATGGCC TCCTGGACAC ATCCACATCA CCGCCTTCGA TATGCGGGAT AGCGCCACAC TACACACCGC GATTCAAACG CTACCAGCAG ACTTTGCCGA CATCGACGTC CTGGTCAACA ACGCTGGTCT GGCACTGGGC ACCGCACCAG CACAACACGC CGACCTGGCA CAGTGGCGGG AGATGATCGA CACCAACATC ACCTCATTGG TGACCTTAAC CCACCACGTC CTACCGACAC TGATCGAACG CAAAGGCACG ATCATCAACA TCAGCTCCGT CGCCGCGACC TATCCCTACA CAGGCGGTAA TGTTTACGCT GGCACGAAAG CATTTGTGAA ACAATTTTCC CTGGGCCTGC GCTCGGATCT CCATGGCACC GGCGTACGCG TGACCAGCAT AGAACCAGGG ATGGCCGAGA CCGAATTCAC CTTAGTCCGT ACTGGCGGCA ACCAAGCCGC TTCCGACGCT CTGTATCGTG GCGCTCACCC GATCACAGCC GAAGATATTG CCGAACAAAT CTTCTACGTC GCCACACTAC CACCACATCT CAACATCAAT CGGCTAGAGA TCATGCCCGT TAACCAATCG TTCGCTGGCT TCCAAGTCGC ACGACAACAG CAATCACAAT TGATCACCCC GCCCCACACA CTTCCCACTC ACTCCAGCGG CACATCTGAC AAATAG
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Protein sequence | MTKTILITGA TSGFGRAAVH RFANAGWRVI ATGRRIERLE ALAAEWPPGH IHITAFDMRD SATLHTAIQT LPADFADIDV LVNNAGLALG TAPAQHADLA QWREMIDTNI TSLVTLTHHV LPTLIERKGT IINISSVAAT YPYTGGNVYA GTKAFVKQFS LGLRSDLHGT GVRVTSIEPG MAETEFTLVR TGGNQAASDA LYRGAHPITA EDIAEQIFYV ATLPPHLNIN RLEIMPVNQS FAGFQVARQQ QSQLITPPHT LPTHSSGTSD K
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