Gene XfasM23_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0107 
Symbol 
ID6203347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp145902 
End bp146717 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content57% 
IMG OID641701637 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001828838 
Protein GI182680678 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA CCATATTGAT CACAGGAGCC ACATCCGGCT TCGGCAGAGC CGCCGTGCAT 
CGCTTCGCCA ACGCCGGCTG GCGTGTCATC GCCACAGGAC GCCGCATTGA GCGCCTGGAA
GCACTCGCCG CCGAATGGCC TCCTGGACAC ATCCACATCA CCGCCTTCGA TATGCGGGAT
AGCGCCACAC TACACACCGC GATTCAAACG CTACCAGCAG ACTTTGCCGA CATCGACGTC
CTGGTCAACA ACGCTGGTCT GGCACTGGGC ACCGCACCAG CACAACACGC CGACCTGGCA
CAGTGGCGGG AGATGATCGA CACCAACATC ACCTCATTGG TGACCTTAAC CCACCACGTC
CTACCGACAC TGATCGAACG CAAAGGCACG ATCATCAACA TCAGCTCCGT CGCCGCGACC
TATCCCTACA CAGGCGGTAA TGTTTACGCT GGCACGAAAG CATTTGTGAA ACAATTTTCC
CTGGGCCTGC GCTCGGATCT CCATGGCACC GGCGTACGCG TGACCAGCAT AGAACCAGGG
ATGGCCGAGA CCGAATTCAC CTTAGTCCGT ACTGGCGGCA ACCAAGCCGC TTCCGACGCT
CTGTATCGTG GCGCTCACCC GATCACAGCC GAAGATATTG CCGAACAAAT CTTCTACGTC
GCCACACTAC CACCACATCT CAACATCAAT CGGCTAGAGA TCATGCCCGT TAACCAATCG
TTCGCTGGCT TCCAAGTCGC ACGACAACAG CAATCACAAT TGATCACCCC GCCCCACACA
CTTCCCACTC ACTCCAGCGG CACATCTGAC AAATAG
 
Protein sequence
MTKTILITGA TSGFGRAAVH RFANAGWRVI ATGRRIERLE ALAAEWPPGH IHITAFDMRD 
SATLHTAIQT LPADFADIDV LVNNAGLALG TAPAQHADLA QWREMIDTNI TSLVTLTHHV
LPTLIERKGT IINISSVAAT YPYTGGNVYA GTKAFVKQFS LGLRSDLHGT GVRVTSIEPG
MAETEFTLVR TGGNQAASDA LYRGAHPITA EDIAEQIFYV ATLPPHLNIN RLEIMPVNQS
FAGFQVARQQ QSQLITPPHT LPTHSSGTSD K