| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0106 |
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| Symbol | |
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| ID | 6203266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 144043 |
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| End bp | 145929 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641701636 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001828837 |
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| Protein GI | 182680677 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.895522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTGGT CTCAAGATCT GGCCCACAAG ACGTATTCGA TCCGGCATTG GGCTGATGGG
TATTTCGAGG TGAACGATGC TGGGCACATG GTGGTGATGC CGCTCGGTGG GGATGGTGTG
CGGATCTCGC TCCCAGAGGT TGTGGATGCT GCGCGTGCTG CAGGTGCCAA GTTACCGCTG
CTGCTGCGTT TCCCTGATAT TTTGGGGCAT CGTCTGGGTA AATTGCAGGC GGCGTTCGCT
CAGGCACAGT CCGAGTGGGA GTATGCAGGT GGTTACACTG CGGTTTACCC GATTAAGGTC
AATCAGCATC GCGGTGTGGC GGGTGTTCTG GCGAGTCACC AGGGGGATGG TTTCGGTTTG
GAAGCCGGCA GCAAACCGGA ATTGATGGCG GTGTTGGCGT TATCGCGTCC GGGTGGGTTG
ATTGTTTGTA ATGGGTATAA GGATCGGGAG TACATCCGTC TTGCGTTGAT CGGACGCAAG
CTTGGTTTGA AGACTTTTAT TGTGATTGAG AAGCCGTCTG AATTGAGAAT GGTGCTTGAG
GAGGCGAAAA CGCTCGATGT ATTGCCTGGT TTGGGCGTCC GGGTGCGTTT GGCGTCGTTG
GGTGCCGGGA AATGGCAGAA CAGCGGTGGC GATAAGGCAA AGTTCGGTTT GTCGCCGCGT
CAAGTGTTGG ATGTATGGAA GGTGTTGCGT GGTACTGAGT ATGCAGATTG TTTAAATGTG
ATGCATTTTC ATATGGGGTC GCAGATCTCC AATGTGCGTG ATATCGCTAA GGGGATGCGT
GAGGCGACCC GTTACTTTGT CGAGCTTTCG CGCTTGGGTG CGAAGATCAC GCATGTGGAT
GTTGGTGGTG GTCTTGGCAT TGATTACGAG GGCACGCGTT CGCGTAGTGA CTGTTCGATC
AATTATGGTC TGCAGGCGTA TGCCAGTCAT ATCGTGCAGC CGCTGGCGAG TGCGTGTGAG
GATTATGATT TGGTGCCGCC ACGCATTGTC ACGGAGTGTG GTCGTGCAAT GACGGCGCAT
CATGCGGTGC TGATCGCTAA TGTGACCGAG GTCGAAGCGG TGCCGGAGGG TCGGGTGCCA
GGGGTGTGTG ATGATGAGCC TGCGGTGGTT CGCCACATGC GCGAGATTTA CGGGGAGTTG
GATGCGCGTC CGGCAATAGA GTTGTTTTAT GAAGCACAGC ACTTTCATGC TGAGGGATTG
GCGGCTTACA CCCTCGGGCA GATTGATTTG GTGCATCGCG CACGTATTGA TGATTTGTTT
TATGCGATTT CGCATGGGGT GCGGGAGCGT CTCAGTCACG AGGAGAAGAG TCACCGTCCG
GTGTTGGATG AGCTGAATGA GCGCTTGGTT GATAAATATT TTGTCAATTT CAGTGTGTTT
GAGTCGATTC CGGATGTGTG GGCTATCAAT CAAATTTTTC CGATTGTCCC CATTGAGCGT
TTGAACGAGG TACCGACCCG ACGTGGTGTG GTCTGTGATT TGACCTGCGA TTCAGATGGT
ACGGTCAAGC AGTATGTGGA AAACGAGAGT CTGGACAGTG CGTTGCCTCT GCATGTGTTG
CGTCATGGCG AGGCTTACAG GATTGGCTTT TTCCTTGTGG GTGCTTATCA GGAAATCCTT
GGCGATATCC ATAATTTGTT TGGCGATACC GATGCGGTTG AGGTTGCAGT CGACGGCAGG
GGGTATCGTA TTGCGCAGCA GCGTTGCGGT GATACGACCG ATGTGATGTT GGACTATGTC
GGTTATGCGC TTGATGAGGT GCGCAGGGTT TATGCGCAAC GTATTGCGGC GGCGGGGATG
TCTGCTGCGG AGTCCAAGGC ATTGAGCGAT ATGTTGGAAG CCGGTCTGAC GGGTTATCCC
TATTTGTCAG ATGTGCCGCT GGAGTGA
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| Protein sequence | MTWSQDLAHK TYSIRHWADG YFEVNDAGHM VVMPLGGDGV RISLPEVVDA ARAAGAKLPL
LLRFPDILGH RLGKLQAAFA QAQSEWEYAG GYTAVYPIKV NQHRGVAGVL ASHQGDGFGL
EAGSKPELMA VLALSRPGGL IVCNGYKDRE YIRLALIGRK LGLKTFIVIE KPSELRMVLE
EAKTLDVLPG LGVRVRLASL GAGKWQNSGG DKAKFGLSPR QVLDVWKVLR GTEYADCLNV
MHFHMGSQIS NVRDIAKGMR EATRYFVELS RLGAKITHVD VGGGLGIDYE GTRSRSDCSI
NYGLQAYASH IVQPLASACE DYDLVPPRIV TECGRAMTAH HAVLIANVTE VEAVPEGRVP
GVCDDEPAVV RHMREIYGEL DARPAIELFY EAQHFHAEGL AAYTLGQIDL VHRARIDDLF
YAISHGVRER LSHEEKSHRP VLDELNERLV DKYFVNFSVF ESIPDVWAIN QIFPIVPIER
LNEVPTRRGV VCDLTCDSDG TVKQYVENES LDSALPLHVL RHGEAYRIGF FLVGAYQEIL
GDIHNLFGDT DAVEVAVDGR GYRIAQQRCG DTTDVMLDYV GYALDEVRRV YAQRIAAAGM
SAAESKALSD MLEAGLTGYP YLSDVPLE
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