| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0105 |
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| Symbol | |
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| ID | 6203245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 142964 |
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| End bp | 143821 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641701635 |
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| Product | spermidine synthase |
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| Protein accession | YP_001828836 |
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| Protein GI | 182680676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.381293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA ACGACACCTG GTTCACCGAA CATTTCCAAA CAACCGGCTC AGCGATCGGC
TTCCGCGTCA CTGGCAAACT AGATGAAGTG CAATCACCAT TCCAGAAAAT CGAAATCTAC
AACAGCACCG ACTGGGGCAA ACTCATGGTG ATCGACGGCG CATTAATGCT CACCAGTAGA
GACAATTTCC TCTATCACGA AATGATCAGC CATCCAGCAC TATTCACCCA CACCGCCCCA
AAGTGCGTGG TGATTATCGG CGGCGGCGAC TGCGGGACAC TGCGCGAAGT CCTCAAACAC
CCAGACATAG AACAAGTCAC CCAATGCGAT ATTGATGAAC AAGTCACACG CATGGCGGAA
AAACATTTCC CTGAACTATG CACCTCCAAC AACGACCCAC GCGCCACACT GCTGTTCAGC
GACGGCGTGG CTTATATGGC CGATTGCCCA ACCAACAGCG TGGATGTGAT TATCGTCGAC
TCAACCGACC CTGTCGGACC AGCCAAAGGC TTATTCAACA GAACCTTCTA CGAAAGCTGT
TTCCGCGCCC TAAAAAATGA TGGATTACTC ATACAACAAT CAGAATCACC ATTGGCACTA
CTAGAACTCA TCAAAGAAAT GCGCCATGAA ATGAGCAAAG CCGGCTTCAA AGCATTCAAG
ACACTACCGT TTCCACAACC TTGCTATCCC ACCGGCTGGT GGAGCGTCAC CCTATCCAGC
AAACAACCCA ACGCGAACTT TGCATTTCGC CAAACCGACG CCCAAACCAA ACCCTTCGAC
ACCCTGTACT ACAACGCACA CCTGCATCAT GGTGTACTCG TCCCGCCCCC CTTCATCGCA
CACGCATTAG GCGAGTAA
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| Protein sequence | MTTNDTWFTE HFQTTGSAIG FRVTGKLDEV QSPFQKIEIY NSTDWGKLMV IDGALMLTSR
DNFLYHEMIS HPALFTHTAP KCVVIIGGGD CGTLREVLKH PDIEQVTQCD IDEQVTRMAE
KHFPELCTSN NDPRATLLFS DGVAYMADCP TNSVDVIIVD STDPVGPAKG LFNRTFYESC
FRALKNDGLL IQQSESPLAL LELIKEMRHE MSKAGFKAFK TLPFPQPCYP TGWWSVTLSS
KQPNANFAFR QTDAQTKPFD TLYYNAHLHH GVLVPPPFIA HALGE
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