Gene XfasM23_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0092 
Symbol 
ID6202970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp127509 
End bp129329 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content58% 
IMG OID641701622 
ProductCopA family copper resistance protein 
Protein accessionYP_001828823 
Protein GI182680663 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTG TTACCTTCCC TTCCCAGGGA GGCATTGACC GGCGTCGCTT CCTAAAAGGC 
TTGGCGTTGG GAGGCGTCGT CGCCGGTACC GGCTTATGGC GTCTTCCTGT CCATGCAGCC
AACCCTGAGT TGCCGCCACT GCAGCGGCGT ACCACTCCCC TAGAGCTGCG TATCGGACAG
TCCAGCGTTA ATTTCACCGG ACGTATGCGT CCAGCCATCA CCGTTAATAA CAGCTTGCCT
GGACCCGTAT TGCGTTGGCG CCAAGGCGAT ACGGTCCAAA TACATGTCAC CAATACCTTG
CCCGATGTGA TGACCTCAAT TCATTGGCAC GGCATCGTTC TGCCCTCCAA CATGGATGGC
GTACCGGGCA TGAGTTTCGA CGGTATTGCA CCAGGCGAAC ACTATCTATA CCGCTTTCAG
TTACACCAGT CTGGGACCTA CTGGTACCAC AGCCACGCCA TGTTTCAAGA ACAGGCCGGC
CTGTATGGAG CGTTGATTAT TGATCCACTG GAGCCGCCTC CCTACCGCGC CGACCGCGAG
CACATCCTCC TATTCTCAGA TTGGACCGAC CTGGACCCTG CCGCACTGTT TCGCAGGCTC
AAAAAAATGT CCTCTTACGA CAACACCTAC CAACGCACCG TCCGCGATTT CTTCCATGAC
ATACACCGTG ATGGCCTGCG CACCACACTG GCCGATCGCC GCATGTGGGG CAGAATGCGG
ATGACCCCGA CAGACCTGTC CGATGTCAAT GCCCATACCT ATACCTACCT GCTGAACGGC
ACCACGCCAG CCGGCCACTG GACTGGATTG TTCCGCCCCG GAGAAAAAGT GCTATTACGG
CTGATTAATG GTTCGGCGAT GACCTATTTT GACGTCCGTA TTCCAGGCCT GAAACTGACC
GTTGTCGCCG TGGATGGCCA ATACGTCCAT CCGGTGACCG TGGATGAATT ACGTATTGCC
CTCGCCGAAA CCTATGATGT CCTGATCCAA CCCCACGGCC AGGATGCCTT TGCAATCTTT
GCCCAGGACA TGGGCCGCAC CGGCTACGCC TGCGGCACCC TCGCCGTGCG TCCCGGCTTA
CACGCCCCCC TGCCGGCATT GGACCCGCGT CCTCGCCTGA CAATGCAGGA CATGGGACAC
GGGATGACGC ATGATCAGCA TGGGAGTCGC GTCTCTGAAA TGGCGGACAT CCCAGGAATG
ACCCATCCTG GCAGACTGGG CGATCATGCC AGCCACGCCA ACCAGCCTCC TGCGCAGCCC
CCTCATGGTT TACATAGCCT TCCGGCGGAC AGAACAGCGC CGCAGCATCC TGCCAGCGAA
CAGAACAATC CCTTGGTGGA CATGCATGTG GACGCACCAC AGCCGCGTTT GAATGATCCC
GGCATTGGCT TGCGTGACAA TGGCCGCCAC GTCTTGACGT ACGCTGATCT GCATAGCCTG
TTCGATGATC CGGATGGACG TGAACCAGGG CGTGAGATCG AATTACATCT CACCGGCAAT
ATGGAGAAAT TCGCCTGGTC GTTTGATGGC ATCCCATTTG CCTCCGCGCA ACCCTTACGA
CTCAACTACG GTGAACGTGT ACGCATCGTC TTGGTCAATG ACACCATGAT GGCGCACCCC
ATTCACCTGC ACGGCTTATG GAGTGACTTA GAGGATGCCA ACGCCGCGTT TCAGGTCCGT
AAACACACCA TCGATATGCC GCCGGGTACA CGCCGCAGCT ACCGTGTGCG TGCCGATGCA
CTGGGGCGCT GGGCCTACCA CTGCCACATG CTGTACCACA TGGAAAGCGG CATGATGCGT
GAAGTACAGG TGCGCCCATG A
 
Protein sequence
MNTVTFPSQG GIDRRRFLKG LALGGVVAGT GLWRLPVHAA NPELPPLQRR TTPLELRIGQ 
SSVNFTGRMR PAITVNNSLP GPVLRWRQGD TVQIHVTNTL PDVMTSIHWH GIVLPSNMDG
VPGMSFDGIA PGEHYLYRFQ LHQSGTYWYH SHAMFQEQAG LYGALIIDPL EPPPYRADRE
HILLFSDWTD LDPAALFRRL KKMSSYDNTY QRTVRDFFHD IHRDGLRTTL ADRRMWGRMR
MTPTDLSDVN AHTYTYLLNG TTPAGHWTGL FRPGEKVLLR LINGSAMTYF DVRIPGLKLT
VVAVDGQYVH PVTVDELRIA LAETYDVLIQ PHGQDAFAIF AQDMGRTGYA CGTLAVRPGL
HAPLPALDPR PRLTMQDMGH GMTHDQHGSR VSEMADIPGM THPGRLGDHA SHANQPPAQP
PHGLHSLPAD RTAPQHPASE QNNPLVDMHV DAPQPRLNDP GIGLRDNGRH VLTYADLHSL
FDDPDGREPG REIELHLTGN MEKFAWSFDG IPFASAQPLR LNYGERVRIV LVNDTMMAHP
IHLHGLWSDL EDANAAFQVR KHTIDMPPGT RRSYRVRADA LGRWAYHCHM LYHMESGMMR
EVQVRP