Gene XfasM23_0092 details

Gene Information

• Locus tag: XfasM23_0092
• ID: 6202970
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 127509
• End bp: 129329
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641701622
• Product: CopA family copper resistance protein
• Protein accession: YP_001828823
• Protein GI: 182680663
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2132] Putative multicopper oxidases
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01480] copper-resistance protein, CopA family

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACTG TTACCTTCCC TTCCCAGGGA GGCATTGACC GGCGTCGCTT CCTAAAAGGC 
TTGGCGTTGG GAGGCGTCGT CGCCGGTACC GGCTTATGGC GTCTTCCTGT CCATGCAGCC 
AACCCTGAGT TGCCGCCACT GCAGCGGCGT ACCACTCCCC TAGAGCTGCG TATCGGACAG 
TCCAGCGTTA ATTTCACCGG ACGTATGCGT CCAGCCATCA CCGTTAATAA CAGCTTGCCT 
GGACCCGTAT TGCGTTGGCG CCAAGGCGAT ACGGTCCAAA TACATGTCAC CAATACCTTG 
CCCGATGTGA TGACCTCAAT TCATTGGCAC GGCATCGTTC TGCCCTCCAA CATGGATGGC 
GTACCGGGCA TGAGTTTCGA CGGTATTGCA CCAGGCGAAC ACTATCTATA CCGCTTTCAG 
TTACACCAGT CTGGGACCTA CTGGTACCAC AGCCACGCCA TGTTTCAAGA ACAGGCCGGC 
CTGTATGGAG CGTTGATTAT TGATCCACTG GAGCCGCCTC CCTACCGCGC CGACCGCGAG 
CACATCCTCC TATTCTCAGA TTGGACCGAC CTGGACCCTG CCGCACTGTT TCGCAGGCTC 
AAAAAAATGT CCTCTTACGA CAACACCTAC CAACGCACCG TCCGCGATTT CTTCCATGAC 
ATACACCGTG ATGGCCTGCG CACCACACTG GCCGATCGCC GCATGTGGGG CAGAATGCGG 
ATGACCCCGA CAGACCTGTC CGATGTCAAT GCCCATACCT ATACCTACCT GCTGAACGGC 
ACCACGCCAG CCGGCCACTG GACTGGATTG TTCCGCCCCG GAGAAAAAGT GCTATTACGG 
CTGATTAATG GTTCGGCGAT GACCTATTTT GACGTCCGTA TTCCAGGCCT GAAACTGACC 
GTTGTCGCCG TGGATGGCCA ATACGTCCAT CCGGTGACCG TGGATGAATT ACGTATTGCC 
CTCGCCGAAA CCTATGATGT CCTGATCCAA CCCCACGGCC AGGATGCCTT TGCAATCTTT 
GCCCAGGACA TGGGCCGCAC CGGCTACGCC TGCGGCACCC TCGCCGTGCG TCCCGGCTTA 
CACGCCCCCC TGCCGGCATT GGACCCGCGT CCTCGCCTGA CAATGCAGGA CATGGGACAC 
GGGATGACGC ATGATCAGCA TGGGAGTCGC GTCTCTGAAA TGGCGGACAT CCCAGGAATG 
ACCCATCCTG GCAGACTGGG CGATCATGCC AGCCACGCCA ACCAGCCTCC TGCGCAGCCC 
CCTCATGGTT TACATAGCCT TCCGGCGGAC AGAACAGCGC CGCAGCATCC TGCCAGCGAA 
CAGAACAATC CCTTGGTGGA CATGCATGTG GACGCACCAC AGCCGCGTTT GAATGATCCC 
GGCATTGGCT TGCGTGACAA TGGCCGCCAC GTCTTGACGT ACGCTGATCT GCATAGCCTG 
TTCGATGATC CGGATGGACG TGAACCAGGG CGTGAGATCG AATTACATCT CACCGGCAAT 
ATGGAGAAAT TCGCCTGGTC GTTTGATGGC ATCCCATTTG CCTCCGCGCA ACCCTTACGA 
CTCAACTACG GTGAACGTGT ACGCATCGTC TTGGTCAATG ACACCATGAT GGCGCACCCC 
ATTCACCTGC ACGGCTTATG GAGTGACTTA GAGGATGCCA ACGCCGCGTT TCAGGTCCGT 
AAACACACCA TCGATATGCC GCCGGGTACA CGCCGCAGCT ACCGTGTGCG TGCCGATGCA 
CTGGGGCGCT GGGCCTACCA CTGCCACATG CTGTACCACA TGGAAAGCGG CATGATGCGT 
GAAGTACAGG TGCGCCCATG A 

 

Protein sequence

MNTVTFPSQG GIDRRRFLKG LALGGVVAGT GLWRLPVHAA NPELPPLQRR TTPLELRIGQ 
SSVNFTGRMR PAITVNNSLP GPVLRWRQGD TVQIHVTNTL PDVMTSIHWH GIVLPSNMDG 
VPGMSFDGIA PGEHYLYRFQ LHQSGTYWYH SHAMFQEQAG LYGALIIDPL EPPPYRADRE 
HILLFSDWTD LDPAALFRRL KKMSSYDNTY QRTVRDFFHD IHRDGLRTTL ADRRMWGRMR 
MTPTDLSDVN AHTYTYLLNG TTPAGHWTGL FRPGEKVLLR LINGSAMTYF DVRIPGLKLT 
VVAVDGQYVH PVTVDELRIA LAETYDVLIQ PHGQDAFAIF AQDMGRTGYA CGTLAVRPGL 
HAPLPALDPR PRLTMQDMGH GMTHDQHGSR VSEMADIPGM THPGRLGDHA SHANQPPAQP 
PHGLHSLPAD RTAPQHPASE QNNPLVDMHV DAPQPRLNDP GIGLRDNGRH VLTYADLHSL 
FDDPDGREPG REIELHLTGN MEKFAWSFDG IPFASAQPLR LNYGERVRIV LVNDTMMAHP 
IHLHGLWSDL EDANAAFQVR KHTIDMPPGT RRSYRVRADA LGRWAYHCHM LYHMESGMMR 
EVQVRP