Gene XfasM23_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0087 
SymbolalaS 
ID6202866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp119200 
End bp121854 
Gene Length2655 bp 
Protein Length884 aa 
Translation table11 
GC content53% 
IMG OID641701616 
Productalanyl-tRNA synthetase 
Protein accessionYP_001828818 
Protein GI182680658 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000138455 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAC CTACCAAATT TACCACTTCA AAGATTCGTA GCGATTTTCT AGAATTTTTC 
AAGAATAAAG GCCACAAAAT CGTGCCTTCC GCGCCGTTGG TTCCAAGCAA CGATCCGACC
TTGCTGTTCA CTAATTCCGG GATGGTCCAG TTCAAGGACG TGTTTCTAGG GGCAGAGAAG
CGCAGTGAGG TCCGTGTGGC TGATGTGCAA TGCTGCTTAC GTGCCGGTGG TAAGCACAAT
GACCTGGATT CGGTTGGTTA CACAGCACGT CATCACACTT TCTTTGAGAT GCTCGGTAAT
TGGTCGTTTG GTGATTATTT TAAGAAGGAA GCGATCATGT GGGCCTGGGA GTTGCTGACC
CAGGTTTGGG AGTTGCCCCC CGAACGTCTG TTGGTGACGG TGTACCACAC TGACGATGAG
TCCTACGCAT TGTGGCGTGA CATGGTGGGT GTGCCGGAAG ATCGAATCGT CCGTATTGGC
GATAACAAAG GTGCGCCGTT TGCCTCGGAT AATTTCTGGC AAATGGCCGA TACCGGCCCG
TGTGGTCCAT GCACCGAGAT CTTCTACGAT CATGGGGAGC ACATTCCAGG GGGGCCTCCT
GGTTCCCCGG GTGAAGATGG AGATCGTTTC ATTGAAATAT GGAATTTGGT GTTCATGCAG
TTTGATCGTC AGTCTGACGG TACGTTAGTG CCTCTGCCGA CGCCCTGTGT GGATACAGGA
ATGGGCTTGG AGCGTTTGGC GGCGATCCTG CAGCATGTAC ACACTAACTA TGAGATTGAT
TTATTTCAGA CCCTGATCCT CAAGGCCGCC GAATTAACTG CTGTTGCGGA CGTGCAGAAC
AAATCGTTGT GCGTGATTGC TGACCATAGT CGTGCGTGTG CGTTTTTGAT CGTCGATGGG
GTGCTTCCGT CCAATGAAGG CCGTGGTTAT GTCTTACGTC GGATCATCCG CCGTGCGCTG
CGTCATGGTT GGATGTTGGG GGTACGTCAA CCGTTCTTCA ACAACATGGT GCCAACCTTG
ATTGCGGTGA TGGGCGATGC TTATCCCAAG CTACAGGCTG CAGCTGAATC GGTGATGCGT
ACTCTCCTGG CTGAGGAAGA GCGTTTTGCC GAGACTTTGG ATGTTGGGAT GAAGATCTTT
AACGAGGTGG CTGCCAAGGT TGCCAATGGT GTGATCCCGG GTAGCGATGC GTTCCGTTTA
TACGATACCT ATGGTTTTCC TGTTGATTTG ACCGCTGATA TTGCGCGTGA GCGTGGTATG
AGGGTGGACA TGGCCGGTTT CGAAGCTGCA ATGACGCAAC AGCGCAAGAC TGCGCGCGCT
GCGGGTAAGT TTGGGCGTGG TGTGCAATTG TCTGCTGAAC GGGCCGCGAC GTTGTCACCC
ACGGTGTTCC TGGGCTATGA GCAGCTTCAG GCCGATGACC TGAGAGTGGT TGCGTTGTTG
TCTGATGGCG GGCTAACTGA TTCGGCGTCG GTCGGTGATG AGGTGATTGT GTTGACCGAC
CGTACACCTT TTTACGCTGA GTCTGGTGGT CAAGTGGGTG ATATTGGAAC GTTGATGGCA
TCCGATGGAG TTCGTCTGGA GGTGACTGAT ACGCAAAAGT TAATGGGTCA GTTCCACGGA
CATGTTGCTC GTATTGTGCA AGGTGGGGTG AAGGTCGGCG ATGTGTTGTC CGGTAGCGTT
GCTGTTGCCA GACGAAAAAT GGTTGCTCTT AACCATTCAG CCACTCACCT GTTGCACTGC
GCGCTGCGCA GCGTGTTTGG TACTCACGTG GTGCAAAAAG GTTCTTTGGT TGCGCCGGAT
CGCCTGCGTT TCGACTTTTC ACATTTTGAG CCTATCTCGG CTGCACAAAT GACATTAATT
GAACGGATGG TCAACGATGA GGTGCGTGCT AATCATCTGG TGATGATCGA GCAAATGGGG
ATGCAGGCTG CGTTGGATGC TGGTGCGATG GCGCTATTTG GAGAGAAATA TGGAGAGCAT
GTGCGCGTAG TAACGATGGG CACTTCGGTC GAACTCTGCG GTGGTACCCA TATCACCCGT
ACGGGTGACA TTGGTTTGTT TAAGATCATT TCCGAGTGTG GCGTGTCCTC TGGAGTGCGT
CGTATTGAGG CTGTGACGGG CGAAAGCGCG TTAAATCATG TCTTGGCCGA AGAGCATCGT
TTGTACGAAG TGGCTGGCCT TATTGGTAGT AACGCGAACA ATGTGGTCAA TCATATTCGC
CAACTCACTG ATCGTCAGAA GACATTGGAG CGTGAACTCG AGAAGCTCAA AGGAAAGCTG
ATCTCCGGAA CGATTACCGA TTTGCTCAGC ATGGCGGTCA ATGTGGCCGA TGTAAAAGTA
GTCGCCGCGC GTCTTGATGG TTTGGATGGG AAGGCACTAC GTGAGGCGCT TGATCGACTT
AAATTGCAGC TGAGTGATGC CGTAATAGTC CTTGCGGGGG TGACCGGCGG CAAGGTGGCT
TTGGTGACTG CTGTCAATGG TCCTCGCGCA ATGGGTAAGG TGAAGGCCGA TACATTACTT
TCGCACGTTG CTACTCAAAT CAACGGCAGG GGAGGTGGCC GTGTTGATTT TGCTCAGGGC
GGCGGTGAGG ATGGACCTTC TCTTCGTTCC GCTCTTGACG GTGTTGCTAC GTGGGTCAAG
CAGCATCTGA ACTGA
 
Protein sequence
MNIPTKFTTS KIRSDFLEFF KNKGHKIVPS APLVPSNDPT LLFTNSGMVQ FKDVFLGAEK 
RSEVRVADVQ CCLRAGGKHN DLDSVGYTAR HHTFFEMLGN WSFGDYFKKE AIMWAWELLT
QVWELPPERL LVTVYHTDDE SYALWRDMVG VPEDRIVRIG DNKGAPFASD NFWQMADTGP
CGPCTEIFYD HGEHIPGGPP GSPGEDGDRF IEIWNLVFMQ FDRQSDGTLV PLPTPCVDTG
MGLERLAAIL QHVHTNYEID LFQTLILKAA ELTAVADVQN KSLCVIADHS RACAFLIVDG
VLPSNEGRGY VLRRIIRRAL RHGWMLGVRQ PFFNNMVPTL IAVMGDAYPK LQAAAESVMR
TLLAEEERFA ETLDVGMKIF NEVAAKVANG VIPGSDAFRL YDTYGFPVDL TADIARERGM
RVDMAGFEAA MTQQRKTARA AGKFGRGVQL SAERAATLSP TVFLGYEQLQ ADDLRVVALL
SDGGLTDSAS VGDEVIVLTD RTPFYAESGG QVGDIGTLMA SDGVRLEVTD TQKLMGQFHG
HVARIVQGGV KVGDVLSGSV AVARRKMVAL NHSATHLLHC ALRSVFGTHV VQKGSLVAPD
RLRFDFSHFE PISAAQMTLI ERMVNDEVRA NHLVMIEQMG MQAALDAGAM ALFGEKYGEH
VRVVTMGTSV ELCGGTHITR TGDIGLFKII SECGVSSGVR RIEAVTGESA LNHVLAEEHR
LYEVAGLIGS NANNVVNHIR QLTDRQKTLE RELEKLKGKL ISGTITDLLS MAVNVADVKV
VAARLDGLDG KALREALDRL KLQLSDAVIV LAGVTGGKVA LVTAVNGPRA MGKVKADTLL
SHVATQINGR GGGRVDFAQG GGEDGPSLRS ALDGVATWVK QHLN