Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0087 |
Symbol | alaS |
ID | 6202866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 119200 |
End bp | 121854 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641701616 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001828818 |
Protein GI | 182680658 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000138455 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAC CTACCAAATT TACCACTTCA AAGATTCGTA GCGATTTTCT AGAATTTTTC AAGAATAAAG GCCACAAAAT CGTGCCTTCC GCGCCGTTGG TTCCAAGCAA CGATCCGACC TTGCTGTTCA CTAATTCCGG GATGGTCCAG TTCAAGGACG TGTTTCTAGG GGCAGAGAAG CGCAGTGAGG TCCGTGTGGC TGATGTGCAA TGCTGCTTAC GTGCCGGTGG TAAGCACAAT GACCTGGATT CGGTTGGTTA CACAGCACGT CATCACACTT TCTTTGAGAT GCTCGGTAAT TGGTCGTTTG GTGATTATTT TAAGAAGGAA GCGATCATGT GGGCCTGGGA GTTGCTGACC CAGGTTTGGG AGTTGCCCCC CGAACGTCTG TTGGTGACGG TGTACCACAC TGACGATGAG TCCTACGCAT TGTGGCGTGA CATGGTGGGT GTGCCGGAAG ATCGAATCGT CCGTATTGGC GATAACAAAG GTGCGCCGTT TGCCTCGGAT AATTTCTGGC AAATGGCCGA TACCGGCCCG TGTGGTCCAT GCACCGAGAT CTTCTACGAT CATGGGGAGC ACATTCCAGG GGGGCCTCCT GGTTCCCCGG GTGAAGATGG AGATCGTTTC ATTGAAATAT GGAATTTGGT GTTCATGCAG TTTGATCGTC AGTCTGACGG TACGTTAGTG CCTCTGCCGA CGCCCTGTGT GGATACAGGA ATGGGCTTGG AGCGTTTGGC GGCGATCCTG CAGCATGTAC ACACTAACTA TGAGATTGAT TTATTTCAGA CCCTGATCCT CAAGGCCGCC GAATTAACTG CTGTTGCGGA CGTGCAGAAC AAATCGTTGT GCGTGATTGC TGACCATAGT CGTGCGTGTG CGTTTTTGAT CGTCGATGGG GTGCTTCCGT CCAATGAAGG CCGTGGTTAT GTCTTACGTC GGATCATCCG CCGTGCGCTG CGTCATGGTT GGATGTTGGG GGTACGTCAA CCGTTCTTCA ACAACATGGT GCCAACCTTG ATTGCGGTGA TGGGCGATGC TTATCCCAAG CTACAGGCTG CAGCTGAATC GGTGATGCGT ACTCTCCTGG CTGAGGAAGA GCGTTTTGCC GAGACTTTGG ATGTTGGGAT GAAGATCTTT AACGAGGTGG CTGCCAAGGT TGCCAATGGT GTGATCCCGG GTAGCGATGC GTTCCGTTTA TACGATACCT ATGGTTTTCC TGTTGATTTG ACCGCTGATA TTGCGCGTGA GCGTGGTATG AGGGTGGACA TGGCCGGTTT CGAAGCTGCA ATGACGCAAC AGCGCAAGAC TGCGCGCGCT GCGGGTAAGT TTGGGCGTGG TGTGCAATTG TCTGCTGAAC GGGCCGCGAC GTTGTCACCC ACGGTGTTCC TGGGCTATGA GCAGCTTCAG GCCGATGACC TGAGAGTGGT TGCGTTGTTG TCTGATGGCG GGCTAACTGA TTCGGCGTCG GTCGGTGATG AGGTGATTGT GTTGACCGAC CGTACACCTT TTTACGCTGA GTCTGGTGGT CAAGTGGGTG ATATTGGAAC GTTGATGGCA TCCGATGGAG TTCGTCTGGA GGTGACTGAT ACGCAAAAGT TAATGGGTCA GTTCCACGGA CATGTTGCTC GTATTGTGCA AGGTGGGGTG AAGGTCGGCG ATGTGTTGTC CGGTAGCGTT GCTGTTGCCA GACGAAAAAT GGTTGCTCTT AACCATTCAG CCACTCACCT GTTGCACTGC GCGCTGCGCA GCGTGTTTGG TACTCACGTG GTGCAAAAAG GTTCTTTGGT TGCGCCGGAT CGCCTGCGTT TCGACTTTTC ACATTTTGAG CCTATCTCGG CTGCACAAAT GACATTAATT GAACGGATGG TCAACGATGA GGTGCGTGCT AATCATCTGG TGATGATCGA GCAAATGGGG ATGCAGGCTG CGTTGGATGC TGGTGCGATG GCGCTATTTG GAGAGAAATA TGGAGAGCAT GTGCGCGTAG TAACGATGGG CACTTCGGTC GAACTCTGCG GTGGTACCCA TATCACCCGT ACGGGTGACA TTGGTTTGTT TAAGATCATT TCCGAGTGTG GCGTGTCCTC TGGAGTGCGT CGTATTGAGG CTGTGACGGG CGAAAGCGCG TTAAATCATG TCTTGGCCGA AGAGCATCGT TTGTACGAAG TGGCTGGCCT TATTGGTAGT AACGCGAACA ATGTGGTCAA TCATATTCGC CAACTCACTG ATCGTCAGAA GACATTGGAG CGTGAACTCG AGAAGCTCAA AGGAAAGCTG ATCTCCGGAA CGATTACCGA TTTGCTCAGC ATGGCGGTCA ATGTGGCCGA TGTAAAAGTA GTCGCCGCGC GTCTTGATGG TTTGGATGGG AAGGCACTAC GTGAGGCGCT TGATCGACTT AAATTGCAGC TGAGTGATGC CGTAATAGTC CTTGCGGGGG TGACCGGCGG CAAGGTGGCT TTGGTGACTG CTGTCAATGG TCCTCGCGCA ATGGGTAAGG TGAAGGCCGA TACATTACTT TCGCACGTTG CTACTCAAAT CAACGGCAGG GGAGGTGGCC GTGTTGATTT TGCTCAGGGC GGCGGTGAGG ATGGACCTTC TCTTCGTTCC GCTCTTGACG GTGTTGCTAC GTGGGTCAAG CAGCATCTGA ACTGA
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Protein sequence | MNIPTKFTTS KIRSDFLEFF KNKGHKIVPS APLVPSNDPT LLFTNSGMVQ FKDVFLGAEK RSEVRVADVQ CCLRAGGKHN DLDSVGYTAR HHTFFEMLGN WSFGDYFKKE AIMWAWELLT QVWELPPERL LVTVYHTDDE SYALWRDMVG VPEDRIVRIG DNKGAPFASD NFWQMADTGP CGPCTEIFYD HGEHIPGGPP GSPGEDGDRF IEIWNLVFMQ FDRQSDGTLV PLPTPCVDTG MGLERLAAIL QHVHTNYEID LFQTLILKAA ELTAVADVQN KSLCVIADHS RACAFLIVDG VLPSNEGRGY VLRRIIRRAL RHGWMLGVRQ PFFNNMVPTL IAVMGDAYPK LQAAAESVMR TLLAEEERFA ETLDVGMKIF NEVAAKVANG VIPGSDAFRL YDTYGFPVDL TADIARERGM RVDMAGFEAA MTQQRKTARA AGKFGRGVQL SAERAATLSP TVFLGYEQLQ ADDLRVVALL SDGGLTDSAS VGDEVIVLTD RTPFYAESGG QVGDIGTLMA SDGVRLEVTD TQKLMGQFHG HVARIVQGGV KVGDVLSGSV AVARRKMVAL NHSATHLLHC ALRSVFGTHV VQKGSLVAPD RLRFDFSHFE PISAAQMTLI ERMVNDEVRA NHLVMIEQMG MQAALDAGAM ALFGEKYGEH VRVVTMGTSV ELCGGTHITR TGDIGLFKII SECGVSSGVR RIEAVTGESA LNHVLAEEHR LYEVAGLIGS NANNVVNHIR QLTDRQKTLE RELEKLKGKL ISGTITDLLS MAVNVADVKV VAARLDGLDG KALREALDRL KLQLSDAVIV LAGVTGGKVA LVTAVNGPRA MGKVKADTLL SHVATQINGR GGGRVDFAQG GGEDGPSLRS ALDGVATWVK QHLN
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