| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0083 |
|---|
| Symbol | |
|---|
| ID | 6202711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 113274 |
|---|
| End bp | 114302 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641701612 |
|---|
| Product | carbohydrate-binding and sugar hydrolysis |
|---|
| Protein accession | YP_001828814 |
|---|
| Protein GI | 182680654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0198036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGC GCATCCTCTC CATTTGTACT CTCATCCTGG CGCTATTACT CATTGCCACT
CATGCCAAAG CAAACATGCA ACCGACCTGT AGTGCATGGG TTGCACCTGG CCAAGATCTA
CAGCAAGCCA TTGATACGTT ACGCAGCGAT GCGCATCCAG CGGTACTGTG TCTAAATAAG
GGCGAGTACC GGGTAGACAA GTTACTGCAT ATTGGCCGCG ATGGAGTACA CATACGTGGC
AGTGGTCCAA ATACGGTGAT TCGTCTCAAT AAAGATGTAC AACAACCATT GATCGTGATT
GGTGACTATC AGAATCAGCA ACCTGCGAAA CAGATTGGCG ATGTAGTGAT CGAACGTATG
CACTTGATCG GCACGACCAA TGTCGAACAC GAATTCATGC CAGAAAGGCC ATATTTGAGT
AACAGCGTTG TGGTATTACG TGCTGCACAC AATGTCAGTC TTTTAGATCT CAAAGTCAGC
CAGTGCCGCA GTGCCTGTCT GCTCAGTGAG TACGACAGCC ACAGGCTGAA TATCGAACGT
AACGATGTGT CCGGCGCAAC CTGGGATGGA GTGTCATTCA ATCGCAGTAC TCATGTCCGT
TTGGTCAATA ACGTGATTCA CGACAACGTT GCTGCTGGGA TCACCACGGA GCATCTGGAA
GACAGTGAGA TCCGCGGAAA TCGCTTGGAA CGCAACGGCA GTCAAGGGTT ATACCTGGCA
GACGCACGCC GCAATGTATT CAAACACAAC CAGTTCATCA GCAATAAAAA ATCCGGTGTG
TTGCTCACCT GCTCAATCCG CTACCGCACC CCGGAGGTGT TGTGCTGGGA TAACAGTATG
AGTCAGGCGA ATGTGTTCGA GTACAACATA TTTCAGAAAA GCCCTTATAT TTACACGATT
GGGGTAGACC GCGCCGCCAA CTGCAAAGGA TCGGATTTTG AGCCGAATAT GTGGCGCAAT
AACAAGGCCG ATACATCCGG CTTCAACCCG CCACCCGATG TTTACGGCAC CTGTGTACAG
ACGCAATAG
|
|---|
| Protein sequence | MSQRILSICT LILALLLIAT HAKANMQPTC SAWVAPGQDL QQAIDTLRSD AHPAVLCLNK
GEYRVDKLLH IGRDGVHIRG SGPNTVIRLN KDVQQPLIVI GDYQNQQPAK QIGDVVIERM
HLIGTTNVEH EFMPERPYLS NSVVVLRAAH NVSLLDLKVS QCRSACLLSE YDSHRLNIER
NDVSGATWDG VSFNRSTHVR LVNNVIHDNV AAGITTEHLE DSEIRGNRLE RNGSQGLYLA
DARRNVFKHN QFISNKKSGV LLTCSIRYRT PEVLCWDNSM SQANVFEYNI FQKSPYIYTI
GVDRAANCKG SDFEPNMWRN NKADTSGFNP PPDVYGTCVQ TQ
|
|---|
| |