| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0082 |
|---|
| Symbol | asnB |
|---|
| ID | 6202705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 111525 |
|---|
| End bp | 113216 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641701611 |
|---|
| Product | asparagine synthetase B |
|---|
| Protein accession | YP_001828813 |
|---|
| Protein GI | 182680653 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.645286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTTCCA TTTTTGGAAT CTTCAACCTG CAACCCAGTG ACAACCTACA GATACTGCGT
CACCAAGCAT TGGAGTGCTC GCAACGGCAA CGGCATCGCG GACCCGATTG GAGCGGCGTT
TACGTTGATG TGGGTGCGAT TCTGGTGCAC GAACGTCTTG CTATCGTCGA TCCAGCCGGC
GGTGCCCAGC CACTGTTCTC CGAGGATGGC ACCCTGGCGT TGGCGGTCAA CGGCGAAATC
TATAACCACG CTGTACTCAA AGGAACATTG CAGCAGCCCT ATGCGTTCCA AACTCATTCT
GATTGCGAAG TGATTAATGC GCTTTACCGC GAAGAAACTC CAACCTCGTT TCTGAATCGC
TTAAATGGAA TTTTTGCATT CGCATTATGG GACAAGACCA CCGGACGTGG CCTCATCGCA
CGCGATCCAA TGGGCGTGGT GCCGCTGTAC TGGGGGCACG ATCAGGATGG TCGCTTACGC
GTCGCGTCAG AGATGAAAGC ATTGGTTGAG CATTGCCCCG ATGTTGCACA ATTCCCACCC
GGCCATTGGT ACGACACCAC AACGGGCACG CTGGTGAAGT ATTACGAACG CCCCTGGAAA
AACTATTCTG CAGTGGAAGG AGTGCAGGTC TCACTACAGG AACTGCGTGA AGCCTTCGAG
CGGGCCGTCC ATCGTCAACT CATGACCGAT GTTCCATACG GTGTACTGCT GTCTGGTGGA
TTGGATTCTT CCCTGGTGGC TGCGGTGGCC GCACGCTACG CACGCCATCG CATCGAAACC
AATGATCAGA GCGAAGCATG GTGGCCACGT CTGCACTCAT TTGCGATTGG ACTGAAAGAC
TCGCCAGATT TGAGTGCGGC GAACGTGGCT GCTGAGGCGT TGAATACCGT CCACCATGGT
TTCGAGTACA CCTTCCAGGA GGGGCTGGAT GTTTTACCTG AAGTGATTCG TCACATTGAA
ACTTACGATG TCACGACGAT TCGCGCATCC ACACCAATGT TCCTGCTGGC ACGTCGCATT
AAGGCGATGG GAGTGAAGAT GGTGTTGTCA GGTGAAGGCA GCGATGAAAT TTTTGGCGGT
TACCTGTACT TCCACAAAGC GCCGAACGCA CGCGAGTTCC ACGAAGAATT GGTCCGTAAG
CTCAACGCCC TGTATTACTA CGACTGCTTG CGCGCCAACA AAGCGATGAT GGCGTGGGGT
GTCGAGCCGC GCGTGCCGTT TTTGGACCGT GAATTTCTCG ATGTGGCTAT GCGGATGGAT
GCGCAGCATA AGATGGTCGA CAAGACCAGC AACGGCCCAC AACGGATGGA GAAAGGCATC
CTGCGTGCAG CGTTTGACGG CTATTTGCCG CCATCAATCC TGTGGCGACA GAAGGAGCAG
TTCAGTGATG GTGTTGGCTA CGGTTGGATC GACGGACTGA AAGCACACGC TGAAACGCAA
GTGTCTGACC ATGCGCTGGC AACTGCCGAG ACACGTTTCC AGGTGAATCC TCCCCAGACC
AAAGAAGCCT ATTACTACCG CAGCATATTT GAGCGCTTCT TCCCAAGCCC GGCGGCGGCT
GAGACGGTAC CGGGCGGTAA ATCAATCGCC TGTTCTTCAC CGGCGGCGAT TGCCTGGGAT
GCCAGCTTTG CCACAATGGC TGACCCATCC GGTCGTGCAG TCAGCGGGGT TCATCAACAA
GCACTGCTGT AG
|
|---|
| Protein sequence | MCSIFGIFNL QPSDNLQILR HQALECSQRQ RHRGPDWSGV YVDVGAILVH ERLAIVDPAG
GAQPLFSEDG TLALAVNGEI YNHAVLKGTL QQPYAFQTHS DCEVINALYR EETPTSFLNR
LNGIFAFALW DKTTGRGLIA RDPMGVVPLY WGHDQDGRLR VASEMKALVE HCPDVAQFPP
GHWYDTTTGT LVKYYERPWK NYSAVEGVQV SLQELREAFE RAVHRQLMTD VPYGVLLSGG
LDSSLVAAVA ARYARHRIET NDQSEAWWPR LHSFAIGLKD SPDLSAANVA AEALNTVHHG
FEYTFQEGLD VLPEVIRHIE TYDVTTIRAS TPMFLLARRI KAMGVKMVLS GEGSDEIFGG
YLYFHKAPNA REFHEELVRK LNALYYYDCL RANKAMMAWG VEPRVPFLDR EFLDVAMRMD
AQHKMVDKTS NGPQRMEKGI LRAAFDGYLP PSILWRQKEQ FSDGVGYGWI DGLKAHAETQ
VSDHALATAE TRFQVNPPQT KEAYYYRSIF ERFFPSPAAA ETVPGGKSIA CSSPAAIAWD
ASFATMADPS GRAVSGVHQQ ALL
|
|---|
| |