Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0079 |
Symbol | dapD |
ID | 6202676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 108561 |
End bp | 109463 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641701608 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_001828810 |
Protein GI | 182680650 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCC AACCCCACCT TAAGGAAACC CCACCGCAAC AGGTGGATAA CAAGGCATCC CCTCCTGTTG TGGATAAGAC ACTTGTTAGT GCGATTGAAG ATGCCTTCGC CCGTTACTCC ACACTGACCG TGGAAGAGAT CGAAGATTCA ATCCGCCCAA CCGTTAACAG AGTGATCGAC GGCCTGGAAA CTGGCGCGTT TCGTGTTGCT GAGCCGGATA ATCACGGTGG CTGGAAGGTT AACGAGTGGC TGAAGAAAGC CGTATTGCTG TACTTCCGTG TCCATGACAC CACGATCGTT GATGCTCAAC CCGCTCCCTT CTGGGACAAA GTTGAATCAC GCTTCTCTGG TTACGATGCA GTGAAATTCC GCGCTGCCGG AGTGCGTGTC GTCCCAGGTG CGATTGCACG ACGTGGTAGC TACTTTGGTA AAGATGTCGT GCTGATGCCA AGCTTCACCA ACATTGGTGC TTATGTGGGT GAAGGCACCA TGATTGACAC CTGGGCAACC GTTGGTTCCT GTGCACAGCT TGGCGCCCAC TGCCATCTTT CTGGCGGTGC GGCGATTGGT GGCGTACTCG AACCATTGCA AGCCAGCCCC GCCATCATCG AAGACCATTG CTTCATTGGT GCCCGTTCGG AAGTGGTGGA GGGTGTGATC GTGGGTCATC ACAGTGTGAT TGGCATGGGT GTGTTCATTA GCCAAAGTAC CCGGATCTAC AACCGTGCCA CTGGCGAAAT CAGTTACGGT TATGTGCCGC CTTACAGCGT TGTGGTGTCT GGCCAGCTTC CAGCAAAGGA TGGGACGCAC TCCCTGTACT GCGCGGTGAT TGTCAAGCAG GTGGACGAAA AAACACGTGC CAAGACCAGT ATCAACGAGC TTCTGCGTGG TTTGGCAGAT TGA
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Protein sequence | MTTQPHLKET PPQQVDNKAS PPVVDKTLVS AIEDAFARYS TLTVEEIEDS IRPTVNRVID GLETGAFRVA EPDNHGGWKV NEWLKKAVLL YFRVHDTTIV DAQPAPFWDK VESRFSGYDA VKFRAAGVRV VPGAIARRGS YFGKDVVLMP SFTNIGAYVG EGTMIDTWAT VGSCAQLGAH CHLSGGAAIG GVLEPLQASP AIIEDHCFIG ARSEVVEGVI VGHHSVIGMG VFISQSTRIY NRATGEISYG YVPPYSVVVS GQLPAKDGTH SLYCAVIVKQ VDEKTRAKTS INELLRGLAD
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