Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0075 |
Symbol | trmD |
ID | 6202592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 105327 |
End bp | 106112 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641701604 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001828806 |
Protein GI | 182680646 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTG ACGTTATCAG CTTGTTCCCC GAGTTCATTA AACAGTCTGT CGGGTTTGGC GTGATCGGTA GAGCACAGGA ACGTGGTTTG CTTGATTTAC ACAACTGGAA TCCACGCGAC TATGCTCAAG GAAATTACCG GCGTGTCGAT GATCGTCCGT TCGGTGGTGG TCCAGGGATG GTGATGCTGA TCGAGCCACT GCGTGCCTGC CTTGAAGCAG TACGGGCAGC AGATCCTCAA CCAGCGCCCT TGATTTATCT CAGTCCGCAA GGTGTCCTGC TGAACCAGTC CCGCGCGAGG AAGCTGGCGA TGCTGCCGCG CATGATATTG CTATGCGGGC GATACGAAGG GATTGACGAG CGTTTTATCG CCCATGAAGT AAACATGGAG TTGTCAATTG GCGACTATGT GTTGTCTGGC GGTGAATTGG GAGCGGCTGT GGTTGTCGAC GCAGTCACCC GGTTACAGGA GGGGGTATTG AACGACGCTG AGTCAGCCAA ACAGGACAGC TTTGAAGCAG CCGATAGCCT GTTTGATTAT CCCCACTACA CTCATCCATC CAATCATGCT TTTGGGAATG TTCCCGAAGT ATTACGCTCA GGTAACCATG TTGCGATCAC GCGTTGGCGT CGCCAGCAGT CGCTGTTGCG CACTTGGTTG CGGCGACCAG ACCTAATAGA TGAAGCGAGA CTGTCGAAAG CTGATCGCTT ACTGCTTGAT GAGATTAAGC GCACACATCC TATGGATACG GATCGAAAAG CGTCAGCCTC TTGGCGTGGA GCATAG
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Protein sequence | MRIDVISLFP EFIKQSVGFG VIGRAQERGL LDLHNWNPRD YAQGNYRRVD DRPFGGGPGM VMLIEPLRAC LEAVRAADPQ PAPLIYLSPQ GVLLNQSRAR KLAMLPRMIL LCGRYEGIDE RFIAHEVNME LSIGDYVLSG GELGAAVVVD AVTRLQEGVL NDAESAKQDS FEAADSLFDY PHYTHPSNHA FGNVPEVLRS GNHVAITRWR RQQSLLRTWL RRPDLIDEAR LSKADRLLLD EIKRTHPMDT DRKASASWRG A
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