| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0052 |
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| Symbol | |
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| ID | 6202107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 78879 |
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| End bp | 81584 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641701581 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001828783 |
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| Protein GI | 182680623 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC AGGAAATATC GCAACGGAGG AAGGTTGACT CCCTTCAGCT CAGTCGCGTG
GAATTCGTCT CAAAATCCGA GATCGATTCC AACCGTAAGC TGATGGCACC AGAGCTGGAT
TTAACACAAA TCAGAGGGCG CTATTTCAAG CAACGCGTGT TGGTCGCTGC AATCGCTTCG
ACTTGCACAC TAATGATGTC AAGATTGGCT TGCGCGGAAA CGGAGACTGA TAATCTTGGA
CAACGCATGC TGGTGGCTAA AGCGGATAAC ACCGCGCCAC AACGTGTAGC GCAAACGGCA
AATTTCAACA ATAGTTTTCT GGTTGGCCAA GCGCGTTCCG TTGACTTAGG AATGTTTTCC
CGAGGCAATC CTGTTATTGC AGGTCTCTAC CGTGCTGACC TTTATGTAAA CGGCCAATGG
AAAGGCCGGC GTGATATGGA ATTTCGTAAT ACTAAAGATG ACAAGGAAGC TGTCACTTGC
ATGACGCTCG CCATGCTGGA TGAACTCGGC ATTGATACAT CGGCGCTAAC AGACTCAGCG
GCTGACATGC AGGCCTGCAA AACCATAGAC CAATGGCTGC CGGATGCCTA TGCACGTTTC
GATGTAGCCA CTCAGCGCTT GGACGTAAGC ATCCCACAAG CCGCTATGCG ACGCTCAGCA
CGTGGCTATG TGAGCCCATC ACTCTGGGAT CATGGTGTCA ATGCGGGATT CATCGGCTAT
GCCTTCAACT GGTATGGTGG CCGCAATGCA AATGCAATAA ATAGCAGACG GCGTAGTGAT
TCAGCCTATC TTGGAATCAA CAGCGGCTTG AATCTAGGCG ATTGGCAATT TCGCCATAAT
TCCAGTTACA GCTGGCATTC CAATGAAGGA TCGCTGTGGC AGAACATTTC CACTTACGCA
CAACGCGCAT TTCCGAACAC AAGTAGCATG CTGACAGTAG GCGACGCCTA CACCAGCGGC
GAATTATTTG ATTCTATCGG TTTCCGTGGT ATCAGCTTGG CAACCGATGA CCGCATGTTG
CCAGACTCGT TACGTGGCTA TGCGCCTATC GTCCGTGGTA TCGCGCAAAG TAATGCGCGT
GTGGAGATAC ACCAGAACGG CCAGTTGATC TACAGCACCA CGGTTGCGCC CGGGGCGTTC
GTCATCGACG ATCTATATCC CACCGGCTAT GGAGGTGACT TACAGGTCAC GGTCTATGAG
ACCGACGGCC GCCAACAGCA GTTCAGTGTC CCCTATGGGT CTGTACCGCA AATGCTCCGA
GCGGGGTCGC AGCGGTACAG CCTAACAGCC GGCAAGATTC GCAATAACAA TCTCAGTCAT
ACCCCTTACT TGTTAGAGGG GACGTATCAA CGCGGCATTA GCAACGCACT CACCGCTTAT
GCAGGCAGCA CGATCAGTCA GCGGTACATC GCAGCGATAG CAGGGGCAGG TCTCTCTACC
CCAGTTGGTG CATTTTCCTT GGACGGTACC GTAGCACGCA CAAAGCTACG TAACGACACA
TTTAGCGGTA CGAGTCTACG CTTAAGCTAC AGCAAGTTAC TGAGCCCAAC CAATACCAAT
ATCACACTCG CTGCATATCG GTATTCGACA TCAGGCTTTT ATGGCTTGCA AGAGGCGATC
ATGGCGATGG ACTACGAAAG GCGCGGCCTC AGCACAGCGT CAATTTATAG ACAGCGCAGT
CAGCTTCAAC TCACTGTGAG CCAACAACTA GGACAGTATG GTTCACTGTA CCTGACAGGA
TCAGCGCGGC AATACTGGAA CCAACGCGGC AACACGATCC AGTACCAGGG AGGCTACAAC
GTATCCTATA AGGGCGTGAG TTACGGCCTC TCAGCGTTAC GCTCACAGAT CCCAAGCATG
CCCAGCGATA CACAGATGCT ATTCACAGTA TCGGTTCCGC TAGGGAAAGC TTATCCGGTG
ATAGTCACTA GCCAAATCGG TTCACGCGAT GGACGCTACG ACAACAGCCG CGTAAGCCTA
GTGGGAGCTA GCGGCAAAGA CAGTGCATTA ACGTATGGGA TAGCCGCATC CGATGCGCGA
AACAGCGCCA CCATGATCGA CGGCAATGTG CAATACCGTA GCCGCTATGC TGCGCTTTCA
GGCAGCTATA GCCATAACCG CAACTATAAT CAGATGAGTC TTGGAGCCAG TGGTAGCATT
GTCCTCCACA GCGGAGTTGC GACACTGGCT CCGCAACGCG GTGACACAAT GGTTATTATC
GAAGCACCGG CAGCCAAGGG CGCCCGCGTA TCCAATATAT CCGGCGTGCG CATTGATAGC
CGTGGCTATG CCGTCGTACC TTATGTCTCA CCGTATCGAA TGAACACGAT CACCCTTGAT
CCCGAAGGGA CAGATCCTGA TGTGGAACTG GAAACATCCA GCCAGCTTAT CGCTCCCTAT
GCAGGTGCAA TCTCCAAAGT GACTTTTGGA ACACGGAAGG GCCGCGCATT GATCGTTAAT
GCACGCACGC CGACTGGTAA AGCTTTGCCA TTCGGTGCAC AGGTTATTGA TGCCGAAGGA
CAATCCGTTG GCCTGGTGGC GCAGGGTAGC CTCATCTATA TACGCGCAAA AGATCCCCAA
GGCCGCCTGA CCATTAAATG GGGGGATCAG GCGGCACAAC AATGCCATTT GGAATATCAA
CTTCCTGCCA ACGAAGCTTC GACTCGCCCA AGCAGTTTCA CAACTTTGGA AGCCATATGT
CGATAA
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| Protein sequence | MKKQEISQRR KVDSLQLSRV EFVSKSEIDS NRKLMAPELD LTQIRGRYFK QRVLVAAIAS
TCTLMMSRLA CAETETDNLG QRMLVAKADN TAPQRVAQTA NFNNSFLVGQ ARSVDLGMFS
RGNPVIAGLY RADLYVNGQW KGRRDMEFRN TKDDKEAVTC MTLAMLDELG IDTSALTDSA
ADMQACKTID QWLPDAYARF DVATQRLDVS IPQAAMRRSA RGYVSPSLWD HGVNAGFIGY
AFNWYGGRNA NAINSRRRSD SAYLGINSGL NLGDWQFRHN SSYSWHSNEG SLWQNISTYA
QRAFPNTSSM LTVGDAYTSG ELFDSIGFRG ISLATDDRML PDSLRGYAPI VRGIAQSNAR
VEIHQNGQLI YSTTVAPGAF VIDDLYPTGY GGDLQVTVYE TDGRQQQFSV PYGSVPQMLR
AGSQRYSLTA GKIRNNNLSH TPYLLEGTYQ RGISNALTAY AGSTISQRYI AAIAGAGLST
PVGAFSLDGT VARTKLRNDT FSGTSLRLSY SKLLSPTNTN ITLAAYRYST SGFYGLQEAI
MAMDYERRGL STASIYRQRS QLQLTVSQQL GQYGSLYLTG SARQYWNQRG NTIQYQGGYN
VSYKGVSYGL SALRSQIPSM PSDTQMLFTV SVPLGKAYPV IVTSQIGSRD GRYDNSRVSL
VGASGKDSAL TYGIAASDAR NSATMIDGNV QYRSRYAALS GSYSHNRNYN QMSLGASGSI
VLHSGVATLA PQRGDTMVII EAPAAKGARV SNISGVRIDS RGYAVVPYVS PYRMNTITLD
PEGTDPDVEL ETSSQLIAPY AGAISKVTFG TRKGRALIVN ARTPTGKALP FGAQVIDAEG
QSVGLVAQGS LIYIRAKDPQ GRLTIKWGDQ AAQQCHLEYQ LPANEASTRP SSFTTLEAIC
R
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