Gene XfasM23_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0039 
Symbol 
ID6202028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp54566 
End bp55600 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content44% 
IMG OID641701563 
ProductparB-like partition protein 
Protein accessionYP_001828771 
Protein GI182680611 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.103386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT TTGGAAATAA AATTAAACCA ACCCAAGAGC ATAATCAGCT TGCAACTGTC 
GCTTTCTCTG GGGAGCGTAT CGAAGAAATT GATCCAGAAT TAATTGACCT AGAAAAACAG
ATGCGTAGCA AGGATAACCC TGGCTTCACG ATCGAATCAT TAATGGAACT TGGCAATGAC
ATGAAACGAG ATGGACAACA TGAGCCTGTT ATATTACGTA AAAACTCTAA AAAACCAGGC
CGTTATTTAA TGGTCGCCGG TGAACGCCGT TGGCTTGCTT GCAAAGCCGT TGATATCAAA
CTCAAAGCCG TAATTAGAGA ATTGACCGAC GATCAGGTAA GACGAGTACA ACGCGCCGAA
AATATCCAAC GCGAAAATCT GACACAACTA GAAATTGCAG TTGCACTGCG CGATGACAAG
GAACGTCTTG GTACGTTAGA AAAAGTCGCC GCCGAATGGA ACAAAGGAAT CAACTGGGTC
TCTGAACGCA TCAACTTTCT CGAAGTAGTA GAGACCAACA GCCTCACCAG TCAAGCTGTT
ACAGAAGGCA TCACCGCTGA TATTACGGCC ATCAACGACC TATATCGACT TGAAAAGGTC
AATCAAACTG CAGCAAAAAC GATTATCGAT CAAGCCAAAG TAGATCCTGG AATCAATATG
CGTAAAACAG TCCGTGAAAA ATTACAAAAT GCCAAGTCAA CAACAAATGA AAAAAACGCG
ACGACTGATT CCCGCATGCA AGAATCCAAA ACTGATTTCC AAGAAGGAGA AACACACCTA
ACAAACATCT CCAATCAAGA GAAACCGACA ACCGTTGCCT CTGCACCTCT CCCCCCCGAT
GCAGCACAGC TTGTTGCATT AGCGGCCAAG CAAATGGAAA CACTTTGTAC CGAGGTCAGC
GCACTTTCCA AGATCCTACA CCAACGTCAA GATGTTATCA GCGCACTCGG TGATGTACTG
CAAAACGTCG TACAAGCACA AGCAGCGTTG TTTCGTACAC GCCATGTATT GGCTTCACTT
GCCAACTTAA AATGA
 
Protein sequence
MSLFGNKIKP TQEHNQLATV AFSGERIEEI DPELIDLEKQ MRSKDNPGFT IESLMELGND 
MKRDGQHEPV ILRKNSKKPG RYLMVAGERR WLACKAVDIK LKAVIRELTD DQVRRVQRAE
NIQRENLTQL EIAVALRDDK ERLGTLEKVA AEWNKGINWV SERINFLEVV ETNSLTSQAV
TEGITADITA INDLYRLEKV NQTAAKTIID QAKVDPGINM RKTVREKLQN AKSTTNEKNA
TTDSRMQESK TDFQEGETHL TNISNQEKPT TVASAPLPPD AAQLVALAAK QMETLCTEVS
ALSKILHQRQ DVISALGDVL QNVVQAQAAL FRTRHVLASL ANLK