Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0024 |
Symbol | |
ID | 6201917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 30019 |
End bp | 30438 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641701548 |
Product | PilE protein |
Protein accession | YP_001828756 |
Protein GI | 182680596 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGTGA ATGATGTAAC TTCCATGATT AAAAACAAAA AACAAAACGG CTTCACTTTG ATAGAAGTGA TGATTGTGGT GGTGATCGTG GCTATCTTGG CAGCGGTTGC TATGACCAGC TACCAAGGGA GCATTCTCAG AACCCGTCGC TCAGCGGCTC AAGCCTGCTT ACAACAACAA GCACAATTTA TAGAGCGTTA TTACACAACC CATATGACGT ACCTTGGGGT GGAAACATCC GCGCCAACAT GCGATCCCAG CGCCAATCTT GATAACTTTT ACCGTTTCAC TGTAACTGCG CAGGCAAGCA CGTTCATGCT GACAGCAGAT CCCCTGGGAG CACAGGCTGG GGATCACTGT GGCAGGCTCA CACTTTCAAA CACTGGGGAG CGCACCCCGC GTGTTGACGG TTGTTGGTGA
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Protein sequence | MFVNDVTSMI KNKKQNGFTL IEVMIVVVIV AILAAVAMTS YQGSILRTRR SAAQACLQQQ AQFIERYYTT HMTYLGVETS APTCDPSANL DNFYRFTVTA QASTFMLTAD PLGAQAGDHC GRLTLSNTGE RTPRVDGCW
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