| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0019 |
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| Symbol | |
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| ID | 6201893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 23753 |
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| End bp | 24328 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641701543 |
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| Product | pre-pilin like leader sequence |
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| Protein accession | YP_001828751 |
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| Protein GI | 182680591 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.808404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTAA ATATGAGCCA ATGGAAGTTG ACCCCACATG CGCCTTCGTA TGGTTTCAGC
ACGGTGGAAT TAATGGTGAC AATTGCCATC CTGGCAATTC TTGCGGGCCT TGCTTATCCC
AGCTTTATGA ATCTGATTAA TGGTGAGCGC TTGACCAGCA GTGCCAACGA GTTAGTTGCT
TCTTTGCAAC TTGCCAGGAC AGAAGCAATC CGCCTCGGTT CTCCCGTTAC TGTGTGTCGC
AGTGACGACG GCAGAACTTG TCGTACTGGG GGGCCTTGGC AACGCTGGGT CACCGTGGCC
AAGGGAAGGA ATAACATCAT CAGGGTAAAC GATGCGATAC CCAACGTTAC TGTGCAAGGC
AGCCCGAGAA TCACCAGTTT AAGCGACCAA ATTGTTTTCA GACCGGATGG GCTGGCGCGT
GACGTTAGCG GCGCATTGCT GACGGCGCAA TTGTCGCTAT GTATGCCCAA CACACGGATG
GCTAACAACC TTCGTTTTGT CAGCATCAAT GGCGGCAGCC GGATCCGCGT CTCTCCCGGA
GCTACAGCCC CATGTTCTCA GCCTAACGAC GAATAA
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| Protein sequence | MYLNMSQWKL TPHAPSYGFS TVELMVTIAI LAILAGLAYP SFMNLINGER LTSSANELVA
SLQLARTEAI RLGSPVTVCR SDDGRTCRTG GPWQRWVTVA KGRNNIIRVN DAIPNVTVQG
SPRITSLSDQ IVFRPDGLAR DVSGALLTAQ LSLCMPNTRM ANNLRFVSIN GGSRIRVSPG
ATAPCSQPND E
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