Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0017 |
Symbol | |
ID | 6203675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 21500 |
End bp | 22594 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641701541 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001828749 |
Protein GI | 182680589 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACCAT TTACCGACGA CCTCCGTATC CGAAAAATTG AACCACTGAC ACCTCCTAAC AAGCTCCTCT TACAACTACC ATGCGATGAG CAGGCATCGC TGACTGTTGC GACCTCACGC AACGCACTGC ACGATATCCT GCACGGCCAC AATGACCGTT TAGCCGTCGT GATAGGCCCA TGCTCAATCC ATGATCCAAT TGCAGCCATT GATTACTCGC AACGTCTACG CCCATTGCGT GAGATGTACA AGGATGCACT AGAAATCGTG ATGCGAGTTT ACTTTCAGAA ACCGCGCACC ACTATTGGTT GGAAAGGATT GGTCAACGAT CCGGATCTTG ATGGCAGCTT CCAGATCAAT AAGGGCTTGC ATATCGCGCG CAACCTGCTG CGCGATATCA ATCATCTCGG CTTACCCGCT GGTGTGGAAT TTCTAGACAC GATTTCGCCG CAATATCTGG CTGACTTAGT CGCCTGGGGT GCCATTGGTG CTCGCACCAC TGAAAGCCAA ATACACCGTG AAATGGCTTC AGGTTTATCG TGCCCGATTG GCTTTAAAAA CAGTACCAGT GGTGATGTGA AGATTGCTGC TGACGCGATT AAAGCAGCTT CGCATCCGCA CCATTTCCTT TCAGTGACAA AGACAGGTGT TGCCGCAGTC GTCGCCACCC AGGGTAACCC CGATTGTCAC GTGATTCTGC GTGGAGGCAA GGTCCCGAAT TACGACGCAA TCAATGTCGA AGCTGCCAGC CAAACATTGC TTAAATCCAA GCTACCGGTG CGACTGATGA TTGATGCGAG CCATGCCAAT AGCGGCAAAA ATCCAAACAA TCAACCTAAG GTGATCGAGA ACATCGTAGA ACAGCTTAAA GCCGGTGAAC GCCGCATCAT CGGTGTCATG ATTGAAAGCC ACATTGTTGG TGGCCGGCAA GAATTAGTCC TTGGAAACAC ACTTAACTAT GGACAGAGCA TTACCGATGC TTGCATCGAC TGGGATACCT CGGTTGCAAT GTTAGAACAG CTCGCTCAGG CCGTACGCGT CAGACAGACT CTACCAACGA CCACTACAGC TAACAAAACA TCAAAAACCC AATAA
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Protein sequence | MPPFTDDLRI RKIEPLTPPN KLLLQLPCDE QASLTVATSR NALHDILHGH NDRLAVVIGP CSIHDPIAAI DYSQRLRPLR EMYKDALEIV MRVYFQKPRT TIGWKGLVND PDLDGSFQIN KGLHIARNLL RDINHLGLPA GVEFLDTISP QYLADLVAWG AIGARTTESQ IHREMASGLS CPIGFKNSTS GDVKIAADAI KAASHPHHFL SVTKTGVAAV VATQGNPDCH VILRGGKVPN YDAINVEAAS QTLLKSKLPV RLMIDASHAN SGKNPNNQPK VIENIVEQLK AGERRIIGVM IESHIVGGRQ ELVLGNTLNY GQSITDACID WDTSVAMLEQ LAQAVRVRQT LPTTTTANKT SKTQ
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