Gene XfasM23_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0009 
Symbol 
ID6202014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp10574 
End bp11239 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content52% 
IMG OID641701532 
ProductTonB family protein 
Protein accessionYP_001828741 
Protein GI182680581 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAG AACTTATTGT CCATAGGTAT GAGCAGGACG ATGTGAGCGA TGCTTTAAAT 
TGGCCTCGTA TCCTTGGTAT TGCTTTTGTA ATCGCATTGC ATCTTGCTGC TTTTATGCTA
TTACTGATTC CTGCTGGGTC ACTCAAGGCT CCGCCCGAGA AGCAACGCCT TGCGGCGGTA
ACAATTGTGG ATTCCCCGCC GCCGCCGCCA CCACCACCAC CACCGCAAGA GGAGAAAAAA
CCAGCGCCCC CTATCAAGAC TTTGGCACCA CCACGTCCTG CGCCAGTCCC TCCGCCGCCA
CAACCTCCAG TCGTGGATGT TCCTCAGCCT CGTCCAAGCG ATGTTGTTGT GCCGCCTGCG
CCGCCTGCGC CGCCGACTCC TCCGAGCGAC ATCAGTGCCA GCGTAGATAT TTCGTCAAAG
AAAATGAACC CACCGAAGTA CCCGCCTACT GCTTTACGGG CTGGTATCCA GGGTGAGGTT
GTGTTGATCA TTGACGTAGA TGCTGATGGT AACGTTACTA ATGTGTCTGT CGAGAAATCT
AGCCGTAATC GGGATCTTGA TCGTGCTGCA ATAGATGCCG CTTCTAAATG GAAGTTTAAT
CCTTCAGTGA TCAATGGAAA GAAATCTGCT GGTCGTGTCC GTGTACCGGT CAATTTTTCA
CTATAG
 
Protein sequence
MSEELIVHRY EQDDVSDALN WPRILGIAFV IALHLAAFML LLIPAGSLKA PPEKQRLAAV 
TIVDSPPPPP PPPPPQEEKK PAPPIKTLAP PRPAPVPPPP QPPVVDVPQP RPSDVVVPPA
PPAPPTPPSD ISASVDISSK KMNPPKYPPT ALRAGIQGEV VLIIDVDADG NVTNVSVEKS
SRNRDLDRAA IDAASKWKFN PSVINGKKSA GRVRVPVNFS L