Gene XfasM23_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0008 
Symbol 
ID6202013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp8937 
End bp10130 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content44% 
IMG OID641701531 
ProductTPR repeat-containing protein 
Protein accessionYP_001828740 
Protein GI182680580 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGCT TGAACTACAA AAAGGACCTG CTGTCTTTAC TCATCCCCAT CTTTCTAGGC 
GGTGGTATTG CTGTGCCTGC TGCGGCACTA CAATCCGACA ATACCTCTTT GAGTCGTTAT
GCTGCTAAGG GAGGTAATTC TGAGAATCTT TATCCTCAGG CTACACGTCA GGAACCAAAG
ATTAAAAACT CCTCAAGATT GGCTGGCAAT TTACAGAAAC TAATAGATGC CTATAACAAG
GGCCAAGATT ATCTTGCGGT ACGTGCACAG GCCGATGGAA TCTTAGCCAA CACGAGCGCT
AATGAAGCTG ATAAATCGTT AGCTGCGCAA CTTGGTGCAC AGGCTGCTTA CAAGCTCGAA
GATGTAGTCG CTGCGCAGCA TTATTTGAAT CAAGCGATTG CTTTGAATGG TTTGGACAAT
AACAACCACT ATCAATCAAT GCTGCTACTG GCCCAATTCC AATTGCAGGA AGGTAAATAT
TCTGAGGGTT TGGCAACACT TGATAAATAC TTGGCTGAAA CCAAGTCACA GCGCGCTGAG
GATCTGATCC TCAAAGGTCA AGCCTTGTAC CAAGCAGGTA AGTACTCCGA AGCGATTCCA
GTTATTAAGC AAGCAATTAC TGCTTCTTCT GAACCTAAAG AAAGCTGGGA AAAGTTATTA
ATATCTACCT ATTTTGAAGT CGGGCAGACA GGTGAAGCTA TTGCCATGGC TGAAGCATTG
GCCGCTAAAG CACCGAACGA TAAGAAAGCC CAGATCGATT TGGCGAGTTT GTACATGCAA
GCTGACCAAA TGGGTAAAGC GGCAGTGGTG CTGGATCAAC TACGCACCGT TGGCAAGCTT
ACCGAAGAGC GTGAATACAA GCAGTTATAT TCGATCTATG CAAATACTTA CAACAAAGAA
AAGGATGTGA TTAATGTCAT TAATGAAGGA ATGAGCAGAG GGATCTTAAA ACCAGATTAT
CAAACCTATC TTGCGTTGGC GCAGTCTTAT TACTATACGG ATCATATCAC CCAAGCGATA
GAAAATTGGA AGAAAGCTGC TCCATTATCT AACGACGGCG AAACATATCT GAACTTAGCC
AAAGTCTTAT TTCAACATGG CCGCCTTGCC GAAGCCCAGC AAGCCGCTCA GCAAGCGTTG
TCTAAGGGGA TAAAGAAACC AGAAGAAGCC AAGAAGATGA TCAACATCAA GTGA
 
Protein sequence
MKRLNYKKDL LSLLIPIFLG GGIAVPAAAL QSDNTSLSRY AAKGGNSENL YPQATRQEPK 
IKNSSRLAGN LQKLIDAYNK GQDYLAVRAQ ADGILANTSA NEADKSLAAQ LGAQAAYKLE
DVVAAQHYLN QAIALNGLDN NNHYQSMLLL AQFQLQEGKY SEGLATLDKY LAETKSQRAE
DLILKGQALY QAGKYSEAIP VIKQAITASS EPKESWEKLL ISTYFEVGQT GEAIAMAEAL
AAKAPNDKKA QIDLASLYMQ ADQMGKAAVV LDQLRTVGKL TEEREYKQLY SIYANTYNKE
KDVINVINEG MSRGILKPDY QTYLALAQSY YYTDHITQAI ENWKKAAPLS NDGETYLNLA
KVLFQHGRLA EAQQAAQQAL SKGIKKPEEA KKMINIK