Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0007 |
Symbol | |
ID | 6202220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 8018 |
End bp | 8833 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641701530 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001828739 |
Protein GI | 182680579 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TATCGTTTTT CTTGATAGCG ACACTGTCGC TTGGCGCTTG TTCAACAGCC ACCTCTCCGA CGGGTCGGCA TCAGGTTTTT AGTGGTGTTT CGCAGCAGCA GCTTAATCAA CTGGGTGAGC AGGCATTTGT TGAGATAAAG GCCAAGGAGA AAATCAGTGG CAATGTGCGT CAGAATGCTT ATGTACGTTG CGTTGTTGAT GCTTTGGTTA CGGAACTGCC GTTACAGTGG CGCCATGTGA AGTGGGAAAC TGTGCTGTTT TTAAACGAAG AACCGAATGC TTTTGCTTTA CCTGGCGGGA AAGTTGGGGT TAATACTGGA ATCTTCCGTG CGGCAAAAAA TCAAGAACAG CTCGCTGCTG TGCTAGGTCA CGAAATTGGT CACGTCGTCT CGCGTCATCA TGAGGAGCGT ATTACTTGGC AACTTGGTAC TCAGGCCGGT TTAGGATTAC TTGGTGTATT GGCAGGTACT GCGTATGGAG ACAGTGCTGC TACTGCGGTT AACCAGATAG GTGGACTGAC TGCTCAAGCT GCGTTTCTGT TGCCCGGCTC CCGTACTCAG GAGCGTGAGG CCGATATTGT TGGGCAGCGT CTCATGGCCC AGGCTGGTTT TGATCCTATC CAAGCGGTTT ACCTTTGGAA GAATATGTTG GCTATTGCAG GGCAGAGACC GCCGCAGTGG TTGTCCACTC ACCCAGATCC GACCAATCGT ATTCGTCAAT TGGAGCAGCA AAGTGCGGTA TTAGCATCGG TTTACGCTCA GGCACGTGAC GCAGGACGTG TGCCGCATTG CAGTCCTGCA GCATAG
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Protein sequence | MKKLSFFLIA TLSLGACSTA TSPTGRHQVF SGVSQQQLNQ LGEQAFVEIK AKEKISGNVR QNAYVRCVVD ALVTELPLQW RHVKWETVLF LNEEPNAFAL PGGKVGVNTG IFRAAKNQEQ LAAVLGHEIG HVVSRHHEER ITWQLGTQAG LGLLGVLAGT AYGDSAATAV NQIGGLTAQA AFLLPGSRTQ EREADIVGQR LMAQAGFDPI QAVYLWKNML AIAGQRPPQW LSTHPDPTNR IRQLEQQSAV LASVYAQARD AGRVPHCSPA A
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