Gene XfasM23_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0007 
Symbol 
ID6202220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp8018 
End bp8833 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content51% 
IMG OID641701530 
Productpeptidase M48 Ste24p 
Protein accessionYP_001828739 
Protein GI182680579 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TATCGTTTTT CTTGATAGCG ACACTGTCGC TTGGCGCTTG TTCAACAGCC 
ACCTCTCCGA CGGGTCGGCA TCAGGTTTTT AGTGGTGTTT CGCAGCAGCA GCTTAATCAA
CTGGGTGAGC AGGCATTTGT TGAGATAAAG GCCAAGGAGA AAATCAGTGG CAATGTGCGT
CAGAATGCTT ATGTACGTTG CGTTGTTGAT GCTTTGGTTA CGGAACTGCC GTTACAGTGG
CGCCATGTGA AGTGGGAAAC TGTGCTGTTT TTAAACGAAG AACCGAATGC TTTTGCTTTA
CCTGGCGGGA AAGTTGGGGT TAATACTGGA ATCTTCCGTG CGGCAAAAAA TCAAGAACAG
CTCGCTGCTG TGCTAGGTCA CGAAATTGGT CACGTCGTCT CGCGTCATCA TGAGGAGCGT
ATTACTTGGC AACTTGGTAC TCAGGCCGGT TTAGGATTAC TTGGTGTATT GGCAGGTACT
GCGTATGGAG ACAGTGCTGC TACTGCGGTT AACCAGATAG GTGGACTGAC TGCTCAAGCT
GCGTTTCTGT TGCCCGGCTC CCGTACTCAG GAGCGTGAGG CCGATATTGT TGGGCAGCGT
CTCATGGCCC AGGCTGGTTT TGATCCTATC CAAGCGGTTT ACCTTTGGAA GAATATGTTG
GCTATTGCAG GGCAGAGACC GCCGCAGTGG TTGTCCACTC ACCCAGATCC GACCAATCGT
ATTCGTCAAT TGGAGCAGCA AAGTGCGGTA TTAGCATCGG TTTACGCTCA GGCACGTGAC
GCAGGACGTG TGCCGCATTG CAGTCCTGCA GCATAG
 
Protein sequence
MKKLSFFLIA TLSLGACSTA TSPTGRHQVF SGVSQQQLNQ LGEQAFVEIK AKEKISGNVR 
QNAYVRCVVD ALVTELPLQW RHVKWETVLF LNEEPNAFAL PGGKVGVNTG IFRAAKNQEQ
LAAVLGHEIG HVVSRHHEER ITWQLGTQAG LGLLGVLAGT AYGDSAATAV NQIGGLTAQA
AFLLPGSRTQ EREADIVGQR LMAQAGFDPI QAVYLWKNML AIAGQRPPQW LSTHPDPTNR
IRQLEQQSAV LASVYAQARD AGRVPHCSPA A